RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
TFF3-202ENST00000398431 NEURL2Q9BR09 285 aa9.4□□□□□ -0.9
TFF3-202ENST00000398431 CENPOQ9BU64 300 aa9.4□□□□□ -0.9
TFF3-202ENST00000398431 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
TFF3-202ENST00000398431 NDUFB11Q9NX14 153 aa9.4□□□□□ -0.9
TFF3-202ENST00000398431 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
TFF3-202ENST00000398431 SORL1Q92673 2214 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 TENM2Q9NT68 2774 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 SEC14L6B5MCN3 397 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 CDRT1O95170 752 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 HTR3BO95264 441 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 IGHG4P01861 327 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 CPEP16870 476 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
TFF3-202ENST00000398431 ZNF134P52741 427 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 MRPL28Q13084 256 aaKnown RBP9.39□□□□□ -0.91
TFF3-202ENST00000398431 CBX3Q13185 183 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 FHL3Q13643 280 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 CXorf66Q5JRM2 361 aaPredicted RBP9.39□□□□□ -0.91
TFF3-202ENST00000398431 TMPRSS11AQ6ZMR5 421 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 C8orf31Q8N9H6 132 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 OR5AK2Q8NH90 309 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 RTN4IP1Q8WWV3 396 aaPredicted RBP9.39□□□□□ -0.91
TFF3-202ENST00000398431 UFD1Q92890 307 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 ARL11Q969Q4 196 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 IFT22Q9H7X7 185 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 GFOD1Q9NXC2 390 aa9.39□□□□□ -0.91
TFF3-202ENST00000398431 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
TFF3-202ENST00000398431 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 TMEM212A6NML5 194 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 BOLA2-SMG1P6H3BVE0 249 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 SLC31A2O15432 143 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 RGS5O15539 181 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 MT-ND4P03905 459 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 RAB3AP20336 220 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 PSMB8P28062 276 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 CHATP28329 748 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 RSU1Q15404 277 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 NHLRC3Q5JS37 347 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 ZNF439Q8NDP4 499 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 CCDC107Q8WV48 283 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 GON7Q9BXV9 100 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 BABAM2Q9NXR7 383 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 ADAM30Q9UKF2 790 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 DHDHQ9UQ10 334 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
TFF3-202ENST00000398431 SIRT4Q9Y6E7 314 aaPredicted RBP9.38□□□□□ -0.91
TFF3-202ENST00000398431 SDCBPO00560 298 aaPredicted RBP9.37□□□□□ -0.91
TFF3-202ENST00000398431 GEMIN2O14893 280 aaKnown RBP9.37□□□□□ -0.91
TFF3-202ENST00000398431 OGG1O15527 345 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 ORC5O43913 435 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 GPX5O75715 221 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 MOSP00540 346 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 IGF1P05019 195 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 TGFBR1P36897 503 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 SOX2P48431 317 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 GBX2P52951 348 aaPredicted RBP9.37□□□□□ -0.91
TFF3-202ENST00000398431 TAS2R43P59537 309 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 IFITM3Q01628 133 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 TPBGQ13641 420 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 SSX1Q16384 188 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 CCDC58Q4VC31 144 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 STEAP3Q658P3 488 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 DMKNQ6E0U4 476 aaPredicted RBP9.37□□□□□ -0.91
TFF3-202ENST00000398431 MZT2AQ6P582 158 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 AKAP14Q86UN6 197 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 OR11H1Q8NG94 326 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 SMIM19Q96E16 107 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 PGLYRP3Q96LB9 341 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 GPER1Q99527 375 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 KLK15Q9H2R5 256 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 TAS2R4Q9NYW5 299 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 IL36GQ9NZH8 169 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
TFF3-202ENST00000398431 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
TFF3-202ENST00000398431 A0A1W2PP11 408 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 TMEM30CPA0ZSE6 113 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 I3L521 148 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 OR7C1O76099 320 aaPredicted RBP9.36□□□□□ -0.91
TFF3-202ENST00000398431 CD1AP06126 327 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 GALP22466 123 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 PPIFP30405 207 aaKnown RBP9.36□□□□□ -0.91
TFF3-202ENST00000398431 TNFSF8P32971 234 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 SDC2P34741 201 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 ZNF137PP52743 207 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 RBM11P57052 281 aaKnown RBP9.36□□□□□ -0.91
TFF3-202ENST00000398431 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 DDI2Q5TDH0 399 aa9.36□□□□□ -0.91
TFF3-202ENST00000398431 RPL22L1Q6P5R6 122 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms