RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 DKK1O94907 266 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PRDX2P32119 198 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 RAB9AP51151 201 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 MUC15Q8N387 334 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 S100PBPQ96BU1 408 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 WBP1Q96G27 269 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 KCNIP4Q6PIL6 250 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 OR2G3Q8NGZ4 309 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 RGP1Q92546 391 aaPredicted RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ORAI1Q96D31 301 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 MESP1Q9BRJ9 268 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ARV1Q9H2C2 271 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 A0A0B4J203 849 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 CEACAM4O75871 244 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 FBP1P09467 338 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 FAM87AP0C7U9 286 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 PGA5P0DJD9 388 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 CD37P11049 281 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 RPS2P15880 293 aaKnown RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 MBNL2Q5VZF2 373 aaKnown RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ALKAL2Q6UX46 152 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 OSR1Q8TAX0 266 aaPredicted RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 SFT2D1Q8WV19 159 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM186Q96B77 213 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 RTN4RQ9BZR6 473 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 SMCO4Q9NRQ5 59 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 MGAM2Q2M2H8 2515 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 K7ENP7 123 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 NPBWR1P48145 328 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 UNC119Q13432 240 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 CLEC18BQ6UXF7 455 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 Q8NFD4 153 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 TACC2O95359 2948 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ZZEF1O43149 2961 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ADAM20O43506 726 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 CNIH1O95406 144 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 P2RX3P56373 397 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 FLYWCH2Q96CP2 140 aaKnown RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 OR2V2Q96R30 315 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 ACTR3CQ9C0K3 210 aaPredicted RBP2.9□□□□□ -1.94
VPS13C-203ENST00000395896 OR2D2Q9H210 308 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 DMXL1Q9Y485 3027 aa2.9□□□□□ -1.94
VPS13C-203ENST00000395896 SPRY3O43610 288 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 HOXA1P49639 335 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 COX19Q49B96 90 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ASCL4Q6XD76 172 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR8B3Q8NGG8 313 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR13D1Q8NGV5 346 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ABHD5Q8WTS1 349 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 CCL17Q92583 94 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF714Q96N38 554 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR8B2Q96RD0 313 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SLX1AQ9BQ83 275 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SPRY4Q9C004 299 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 FAM96BQ9Y3D0 163 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 CRYM-AS1A6NIL9 109 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GDF9O60383 454 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 DAOP14920 347 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ACKR3P25106 362 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ERVFRD-1P60508 538 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ARSJQ5FYB0 599 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF645Q8N7E2 425 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR52M1Q8NGK5 317 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 RNF2Q99496 336 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 BARX1Q9HBU1 254 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 C1orf196B1AJZ1 125 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 B4DEV8 164 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 YIF1AO95070 293 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SNAI3Q3KNW1 292 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 DNM1P46Q6ZS02 220 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 GGACTQ9BVM4 153 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 DEPPQ9NTK1 212 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 MARCH11A6NNE9 402 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 LDLRAD4O15165 306 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SSSCA1O60232 199 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 EXOSC2Q13868 293 aaKnown RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SPACA3Q8IXA5 215 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 POC1AQ8NBT0 407 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR5C1Q8NGR4 320 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 H1FXQ92522 213 aaKnown RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 RPEQ96AT9 228 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 MALSU1Q96EH3 234 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 C14orf79Q96F83 325 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 C1QTNF6Q9BXI9 259 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SLC25A10Q9UBX3 287 aaPredicted RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 CACNG5Q9UF02 275 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 INSIG2Q9Y5U4 225 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 P2RY4P51582 365 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 SPANXN5Q5MJ07 72 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 FAM213BQ8TBF2 198 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 MRPL24Q96A35 216 aaKnown RBP2.9□□□□□ -1.95
VPS13C-203ENST00000395896 MMP26Q9NRE1 261 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 AK3Q9UIJ7 227 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 TNFSF18Q9UNG2 199 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 LIPGQ9Y5X9 500 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 OR2H2O95918 312 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 PATE4P0C8F1 98 aa2.9□□□□□ -1.95
VPS13C-203ENST00000395896 FHL1Q13642 323 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms