RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 JPT1Q9UK76 154 aa12.67□□□□□ -0.38
CXCL12-206ENST00000395795 IGF1P05019 195 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 UBBP0CG47 229 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 MYF6P23409 242 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 CNTFRP26992 372 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 OR3A3P47888 321 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 RPS25P62851 125 aaKnown RBP12.66□□□□□ -0.38
CXCL12-206ENST00000395795 KIAA0141Q14154 515 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-206ENST00000395795 PNLIPRP3Q17RR3 467 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 NKAPLQ5M9Q1 402 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
CXCL12-206ENST00000395795 LIPKQ5VXJ0 399 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 FOXRED2Q8IWF2 684 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 FAM89BQ8N5H3 189 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 ABHD14AQ9BUJ0 271 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 TMEM59Q9BXS4 323 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 CST11Q9H112 138 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 LPAR5Q9H1C0 372 aa12.66□□□□□ -0.38
CXCL12-206ENST00000395795 DUS4LO95620 317 aaKnown RBP12.65□□□□□ -0.38
CXCL12-206ENST00000395795 IGHG4P01861 327 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 MYCNOSP40205 109 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 FOXE3Q13461 319 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 HSD17B12Q53GQ0 312 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 GLT8D1Q68CQ7 371 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 ZNF695Q8IW36 515 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 TMEM203Q969S6 136 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 HDHD3Q9BSH5 251 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-206ENST00000395795 ANKRD60Q9BZ19 345 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 RAB9BQ9NP90 201 aa12.65□□□□□ -0.38
CXCL12-206ENST00000395795 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-206ENST00000395795 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 TRBV6-6A0A0A6YYG2 114 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SOCS1O15524 211 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 PROP1O75360 226 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
CXCL12-206ENST00000395795 CRHBPP24387 322 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 PSMB8P28062 276 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SLC6A1P30531 599 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 TMEM50BP56557 158 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SLC35B1P78383 322 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 MED22Q15528 200 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 TEX38Q6PEX7 206 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 KCNG3Q8TAE7 436 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 AGMATQ9BSE5 352 aa12.64□□□□□ -0.39
CXCL12-206ENST00000395795 SLC17A2O00624 439 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 LDLRAD4O15165 306 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 BPNT1O95861 308 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 ELANEP08246 267 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 SOX6P35712 828 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 CDX1P47902 265 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-206ENST00000395795 ACTBP60709 375 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 PLA2G7Q13093 441 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 P2RY14Q15391 338 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 C19orf54Q5BKX5 351 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 OR51D1Q8NGF3 324 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 OR6M1Q8NGM8 313 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 GALMQ96C23 342 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 RASL11BQ9BPW5 248 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 KLK15Q9H2R5 256 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 ISYNA1Q9NPH2 558 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
CXCL12-206ENST00000395795 IGHV7-81A0A0B4J1V7 117 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 CCL24O00175 119 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 NDUFA3O95167 84 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 CT45A6P0DMU7 189 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 CT45A5P0DMU8 189 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 CT45A7P0DMV0 189 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 SLC2A2P11168 524 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-206ENST00000395795 CPEP16870 476 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-206ENST00000395795 MAP2K4P45985 399 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 NDPQ00604 133 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 FABP5Q01469 135 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-206ENST00000395795 FHL3Q13643 280 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 ASPHD1Q5U4P2 390 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 NPBQ8NG41 125 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 UFD1Q92890 307 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 SCN3BQ9NY72 215 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 AK6Q9Y3D8 172 aaKnown RBP12.62□□□□□ -0.39
CXCL12-206ENST00000395795 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
CXCL12-206ENST00000395795 IGKV1-6A0A0C4DH72 117 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 G3V318 75 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 RGS10O43665 173 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
CXCL12-206ENST00000395795 HSPA13P48723 471 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms