RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 HBZP02008 142 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 IFNA6P05013 189 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
SNCA-205ENST00000394991 DCKP27707 260 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 MRPL28Q13084 256 aaKnown RBP12.1□□□□□ -0.47
SNCA-205ENST00000394991 GNMTQ14749 295 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 SYT6Q5T7P8 510 aaPredicted RBP12.1□□□□□ -0.47
SNCA-205ENST00000394991 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 NPBQ8NG41 125 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 NEK7Q8TDX7 302 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
SNCA-205ENST00000394991 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
SNCA-205ENST00000394991 CYYR1Q96J86 154 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 ING4Q9UNL4 249 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 A3GALT2U3KPV4 340 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 TMEM212A6NML5 194 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 MAGEB3O15480 346 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 SPINT2O43291 252 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 GNAO1P09471 354 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 MYL12AP19105 171 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 SERPINA2P20848 420 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 SOX2P48431 317 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 ETV1P50549 477 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
SNCA-205ENST00000394991 TMEM30BQ3MIR4 351 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 OR2G6Q5TZ20 316 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 TMPRSS11AQ6ZMR5 421 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 LINC00596Q86U02 117 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 ANKRD13BQ86YJ7 626 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 TMEM80Q96HE8 168 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 RHOVQ96L33 236 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 FAM110AQ9BQ89 295 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 THAP7Q9BT49 309 aaPredicted RBP12.09□□□□□ -0.47
SNCA-205ENST00000394991 ELOVL1Q9BW60 279 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 CST11Q9H112 138 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 METTL9Q9H1A3 318 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 DIMT1Q9UNQ2 313 aaKnown RBP12.09□□□□□ -0.47
SNCA-205ENST00000394991 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
SNCA-205ENST00000394991 HERC2O95714 4834 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 RCC1P18754 421 aaPredicted RBP12.08□□□□□ -0.48
SNCA-205ENST00000394991 CX3CL1P78423 397 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 MORN2Q502X0 79 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 STEAP3Q658P3 488 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
SNCA-205ENST00000394991 TCTEX1D1Q8N7M0 179 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 GGHQ92820 318 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 JAM3Q9BX67 310 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 RCC2Q9P258 522 aaKnown RBP12.08□□□□□ -0.48
SNCA-205ENST00000394991 GAB2Q9UQC2 676 aa12.08□□□□□ -0.48
SNCA-205ENST00000394991 EXOSC1Q9Y3B2 195 aaKnown RBP12.08□□□□□ -0.48
SNCA-205ENST00000394991 FCN1O00602 326 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 CSTBP04080 98 aaKnown RBP12.07□□□□□ -0.48
SNCA-205ENST00000394991 OR3A3P47888 321 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 TPPP2P59282 170 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 MED21Q13503 144 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 C6orf183Q5T699 404 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 CD200R1LQ6Q8B3 271 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 GAPTQ8N292 157 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 STX19Q8N4C7 294 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
SNCA-205ENST00000394991 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 CLEC2DQ9UHP7 191 aa12.07□□□□□ -0.48
SNCA-205ENST00000394991 EFCAB10A6NFE3 127 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 RPSAP08865 295 aaKnown RBP12.06□□□□□ -0.48
SNCA-205ENST00000394991 SNRPBP14678 240 aaKnown RBP12.06□□□□□ -0.48
SNCA-205ENST00000394991 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
SNCA-205ENST00000394991 ST3GAL4Q11206 333 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 DDI2Q5TDH0 399 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 XAF1Q6GPH4 301 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 RPL22L1Q6P5R6 122 aaKnown RBP12.06□□□□□ -0.48
SNCA-205ENST00000394991 IL34Q6ZMJ4 242 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 BPIFB6Q8NFQ5 453 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 NRG4Q8WWG1 115 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 RAB9BQ9NP90 201 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 ETAA1Q9NY74 926 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 ERGIC3Q9Y282 383 aa12.06□□□□□ -0.48
SNCA-205ENST00000394991 SAA2-SAA4A0A096LPE2 208 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 RRHO14718 337 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 ARPC1BO15143 372 aaKnown RBP12.05□□□□□ -0.48
SNCA-205ENST00000394991 RGS11O94810 467 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 SAA2P0DJI9 122 aaPredicted RBP12.05□□□□□ -0.48
SNCA-205ENST00000394991 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
SNCA-205ENST00000394991 SLC22A6Q4U2R8 563 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms