RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SLC52A3Q9NQ40 469 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 NEU3Q9UQ49 428 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PXMP4Q9Y6I8 212 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 VSTM2AQ8TAG5 236 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 FAM60AQ9NP50 221 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 IGHV3OR16-8A0A075B7F1 116 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 CCL3P10147 92 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 EFNB2P52799 333 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
SIN3A-202ENST00000394947 LINC01555Q8NAE3 123 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 ZNF707Q96C28 371 aaPredicted RBP10.68□□□□□ -0.7
SIN3A-202ENST00000394947 RARRES2Q99969 163 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 C1RLQ9NZP8 487 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 PHIPQ8WWQ0 1821 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
SIN3A-202ENST00000394947 PGPA6NDG6 321 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 NPBWR2P48146 333 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 ZNF273Q14593 569 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 CADM4Q8NFZ8 388 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 TUBA4BQ9H853 241 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 RNF122Q9H9V4 155 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 PGA4P0DJD7 388 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 PGA5P0DJD9 388 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 SIRT7Q9NRC8 400 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM229AB2RXF0 380 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 IGHV4-39P01824 125 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 GPX1P07203 203 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 RPL31P62899 125 aaKnown RBP10.68□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
SIN3A-202ENST00000394947 TP53I13Q8NBR0 393 aaPredicted RBP10.68□□□□□ -0.7
SIN3A-202ENST00000394947 M0QZK8 103 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 GGCTO75223 188 aaKnown RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 UNQ5815/PRO19632Q6UWF5 114 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 PTP4A1Q93096 173 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 CA10Q9NS85 328 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 TRAV21A0A0B4J279 112 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 A1L4Q6 167 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 GP1BAP07359 652 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 SLC25A1P53007 311 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 ZNF826PQ6ZT77 177 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 TLNRD1Q9H1K6 362 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 LHX9Q9NQ69 397 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 WNT16Q9UBV4 365 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 RGPD5Q99666 1765 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 HYPMO75409 117 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 SPEM1Q8N4L4 309 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 OR4D5Q8NGN0 318 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 OR1L8Q8NGR8 309 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 HEXA-AS1Q9H8Q6 139 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 UBE2V2Q15819 145 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 UBALD2Q8IYN6 164 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM171Q8WVE6 324 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 ZNFX1Q9P2E3 1918 aaKnown RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 MON2Q7Z3U7 1717 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 ARRDC5A6NEK1 342 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 IL9P15248 144 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
SIN3A-202ENST00000394947 XAF1Q6GPH4 301 aa10.67□□□□□ -0.7
SIN3A-202ENST00000394947 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 IL20Q9NYY1 176 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 PRNDQ9UKY0 176 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 hCG_38984A0A1B0GV85 526 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM177Q53S58 311 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 CBLN4Q9NTU7 201 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM210A6NLX4 147 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 CTSDP07339 412 aaPredicted RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 COX6B1P14854 86 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 OR2H1Q9GZK4 316 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 IGHV1OR21-1A0A087WYE8 117 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 C1QL1O75973 258 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 CENPVQ7Z7K6 275 aaPredicted RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 C4AP0C0L4 1744 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 C4BP0C0L5 1744 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 NDUFA3O95167 84 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 MFAP4P55083 255 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 PGLYRP3Q96LB9 341 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 SSBP3Q9BWW4 388 aaPredicted RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 FOXI3A8MTJ6 420 aaPredicted RBP10.66□□□□□ -0.7
SIN3A-202ENST00000394947 CELA2AP08217 269 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 TEX30Q5JUR7 227 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 WFDC12Q8WWY7 111 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 MAP1LC3AQ9H492 121 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 KLK13Q9UKR3 277 aa10.66□□□□□ -0.7
SIN3A-202ENST00000394947 HKR1P10072 659 aa10.65□□□□□ -0.7
SIN3A-202ENST00000394947 GPR6P46095 362 aaPredicted RBP10.65□□□□□ -0.7
SIN3A-202ENST00000394947 ARF6P62330 175 aa10.65□□□□□ -0.7
SIN3A-202ENST00000394947 CLEC2AQ6UVW9 174 aa10.65□□□□□ -0.7
SIN3A-202ENST00000394947 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms