RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CCDC110Q8TBZ0 833 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GNPDA2Q8TDQ7 276 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GPR151Q8TDV0 419 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 DQX1Q8TE96 717 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM3CQ92520 227 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ELMO1Q92556 727 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 THRSPQ92748 146 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NCLNQ969V3 563 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TEKT1Q969V4 418 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 REEP6Q96HR9 211 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC136Q96JN2 1154 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 C16orf45Q96MC5 204 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 YPEL2Q96QA6 119 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SEC62Q99442 399 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PLIN2Q99541 437 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SLF1Q9BQI6 1058 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC50A1Q9BRV3 221 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ANAPC13Q9BS18 74 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 AGMATQ9BSE5 352 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CALN1Q9BXU9 219 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PARD6BQ9BYG5 372 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC25A31Q9H0C2 315 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM117Q9H0C3 514 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 AGPAT4-IT1Q9H0P7 198 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM138Q9NPI0 162 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PFDN4Q9NQP4 134 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SDHAF3Q9NRP4 125 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NMRK1Q9NWW6 199 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CHCHD3Q9NX63 227 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PAQR5Q9NXK6 330 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ORMDL1Q9P0S3 153 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ZMAT5Q9UDW3 170 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLEC2DQ9UHP7 191 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 BOKQ9UMX3 212 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SNX12Q9UMY4 172 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GSTK1Q9Y2Q3 226 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 INSIG2Q9Y5U4 225 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SNX8Q9Y5X2 465 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SNX5Q9Y5X3 404 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 KPTNQ9Y664 436 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SPAG9O60271 1321 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CNTNAP1P78357 1384 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CARMIL1Q5VZK9 1371 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PIK3R4Q99570 1358 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 BCL9LQ86UU0 1499 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 BICRAQ9NZM4 1560 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PPRC1Q5VV67 1664 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CAMTA1Q9Y6Y1 1673 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ATAD5Q96QE3 1844 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PCDH15Q96QU1 1955 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PLCE1Q9P212 2302 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 C5orf42Q9H799 3197 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 REV3LO60673 3130 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 BRCA1P38398 1863 aaKnown RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 WDR90Q96KV7 1748 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 TRPM3Q9HCF6 1732 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 INSRP06213 1382 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 FLT4P35916 1363 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 KIF24Q5T7B8 1368 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 TTC21AQ8NDW8 1320 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 TRBV10-2A0A0K0K1G8 114 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 GOLGA8JA6NMD2 632 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 NCF1CA8MVU1 366 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 HACD1B0YJ81 288 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 B4E171 279 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 MCRIP1C9JLW8 97 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 JMJD7-PLA2G4BH0Y9G9 81 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 SMKR1H3BMG3 65 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 H3BNG1 76 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 H3BT86 120 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMD12O00232 456 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 UPK1AO00322 258 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 TRDMT1O14717 391 aaKnown RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PPP1R2P9O14990 202 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 CRXO43186 299 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 NDUFS5O43920 106 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 RAMP3O60896 148 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 HSF2BPO75031 334 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 UPK1BO75841 260 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 NDUFB2O95178 105 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 AHSA1O95433 338 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 LDHAP00338 332 aaKnown RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 HPRT1P00492 218 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PTHP01270 115 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 MBP02144 154 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PPBPP02775 128 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 FBP1P09467 338 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 SPINK8P0C7L1 97 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 BAALC-AS2P0C853 105 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 GOLGA8HP0CJ92 632 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PGA4P0DJD7 388 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PGA3P0DJD8 388 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PGA5P0DJD9 388 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 CCL3P10147 92 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 MIFP14174 115 aa-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 NCF1P14598 390 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 PORP16435 677 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ28-201ENST00000390509 CCNOP22674 350 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms