RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SMDT1Q9H4I9 107 aa8.06□□□□□ -1.12
TRIM39-202ENST00000376659 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 TNFSF12O43508 249 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 IGHV2-5P01817 119 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF44P15621 663 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 CD82P27701 267 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 APLNRP35414 380 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 CR1LQ2VPA4 569 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 RNF212Q495C1 297 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 ACSF3Q4G176 576 aaPredicted RBP8.05□□□□□ -1.12
TRIM39-202ENST00000376659 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM182Q6ZP80 229 aaPredicted RBP8.05□□□□□ -1.12
TRIM39-202ENST00000376659 FAM90A1Q86YD7 464 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 C9orf106Q8NAJ2 232 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 CLDND2Q8NHS1 167 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 LUZP4Q9P127 313 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 DMXL2Q8TDJ6 3036 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM210A6NLX4 147 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 ANKRD30BLA7E2S9 258 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 C15orf65H3BRN8 121 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 HS3ST1O14792 307 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 CHST1O43916 411 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 IZUMO4Q1ZYL8 232 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF506Q5JVG8 444 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 TGIF2LXQ8IUE1 241 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 Q8IYB0 196 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF525Q8N782 197 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 OR5C1Q8NGR4 320 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 MAGT1Q9H0U3 335 aa8.05□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 MED19A0JLT2 244 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 C5orf52A6NGY3 159 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 AGPAT2O15120 278 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 SRP19P09132 144 aaKnown RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 SELEP16581 610 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PLA2G5P39877 138 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 OR3A1P47881 315 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PLGLB1Q02325 96 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 VWC2Q2TAL6 325 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 MBNL2Q5VZF2 373 aaKnown RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TMPRSS7Q7RTY8 843 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF561Q8N587 486 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 DRAM1Q8N682 238 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 SLC25A40Q8TBP6 338 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 RTL8AQ9BWD3 113 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 OPN3Q9H1Y3 402 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 SEBOXQ9HB31 216 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 WASF3Q9UPY6 502 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 WSB1Q9Y6I7 421 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 BORCS7-ASMTA0A0B4J1R7 106 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 RUNX1Q01196 453 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TBC1D28Q2M2D7 210 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 AVPI1Q5T686 147 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF695Q8IW36 515 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 KLF14Q8TD94 323 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 RDH5Q92781 318 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 C14orf144Q96I85 54 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PRRC2CQ9Y520 2896 aaKnown RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 A0A1W2PPE3 182 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF891A8MT65 544 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 UBE2CO00762 179 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 CD46P15529 392 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 CEBPDP49716 269 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TAS2R30P59541 319 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 RPS23P62266 143 aaKnown RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 RPL30P62888 115 aaKnown RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 CLINT1Q14677 625 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PDLIM3Q53GG5 364 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 VWA1Q6PCB0 445 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 WDR82Q6UXN9 313 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM14EPQ6UXP3 125 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 FAM214BQ7L5A3 538 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 HSD17B11Q8NBQ5 300 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 FDCSPQ8NFU4 85 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 OR10J5Q8NHC4 309 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TCEAL7Q9BRU2 100 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 AGMATQ9BSE5 352 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 VSIRQ9H7M9 311 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM9BQ9NQ34 198 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 PLSCR4Q9NRQ2 329 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 ERRFI1Q9UJM3 462 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-202ENST00000376659 DMRT1Q9Y5R6 373 aa8.04□□□□□ -1.12
TRIM39-202ENST00000376659 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 TRAV39A0A0B4J263 110 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 UMAD1C9J7I0 102 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 SULT1A1P50225 295 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 FOXF2Q12947 444 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF266Q14584 549 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 INO80CQ6PI98 192 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-202ENST00000376659 IL22RA1Q8N6P7 574 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 S100PBPQ96BU1 408 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 SPIN2AQ99865 258 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 SPIN2BQ9BPZ2 258 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 SLC35B3Q9H1N7 401 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 KIAA1456Q9P272 454 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 METRNQ9UJH8 293 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 DCHS2Q6V1P9 2916 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 RP1L1Q8IWN7 2480 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms