RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FBN2P35556 2912 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
HMGA1-203ENST00000374116 DPRXA6NFQ7 191 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 DEFB108AA8MXU0 73 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 ADAP1O75689 374 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 KNG1P01042 644 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FUT3P21217 361 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 CCNOP22674 350 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 RBMXP38159 391 aaKnown RBP12.09□□□□□ -0.47
HMGA1-203ENST00000374116 OR2B8PP59922 312 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 PLP2Q04941 152 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 MRPL21Q7Z2W9 205 aaKnown RBP12.09□□□□□ -0.47
HMGA1-203ENST00000374116 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 SGPP2Q8IWX5 399 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 ZNF295-AS1Q8N0V1 137 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 RHOVQ96L33 236 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 ZNF581Q9P0T4 197 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 AMDHD2Q9Y303 409 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 BTBD17A6NE02 478 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 YIF1AO95070 293 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 OR8U9P0C7N5 309 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 CECR9P0C854 216 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 PRDX4Q13162 271 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 CEACAM21Q3KPI0 293 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 SLC25A26Q70HW3 274 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 NEUROG1Q92886 237 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 BOD1Q96IK1 185 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 ZNF286AQ9HBT8 521 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
HMGA1-203ENST00000374116 A0A087X0M5 115 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 A0A1B0GX30 115 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 M0R036 132 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 KCNAB3O43448 404 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 JTBO76095 146 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
HMGA1-203ENST00000374116 RPL7L1Q6DKI1 246 aaKnown RBP12.07□□□□□ -0.48
HMGA1-203ENST00000374116 CDPF1Q6NVV7 123 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 BEND2Q8NDZ0 799 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 OR10C1Q96KK4 312 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 OR51B6Q9H340 312 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 DOK5Q9P104 306 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 TACC2O95359 2948 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 AKAP6Q13023 2319 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 A0A087WWC5 75 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 A6NNC1 897 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 ZNF728P0DKX0 622 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 RAB4AP20338 218 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 GUK1Q16774 197 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 AKIRIN2Q53H80 203 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 NANOS1Q8WY41 292 aaKnown RBP12.07□□□□□ -0.48
HMGA1-203ENST00000374116 SPACA1Q9HBV2 294 aa12.07□□□□□ -0.48
HMGA1-203ENST00000374116 MAST4O15021 2626 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 TSPAN15O95858 294 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 NGFP01138 241 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 CD40P25942 277 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 LOXP28300 417 aaPredicted RBP12.06□□□□□ -0.48
HMGA1-203ENST00000374116 WNT5AP41221 380 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
HMGA1-203ENST00000374116 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 ARL6IP6Q8N6S5 226 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 DYRK2Q92630 601 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 FGF23Q9GZV9 251 aaPredicted RBP12.06□□□□□ -0.48
HMGA1-203ENST00000374116 LIME1Q9H400 295 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 ZNF442Q9H7R0 627 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 KCNIP3Q9Y2W7 256 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 CSMD1Q96PZ7 3565 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 CACNA1DQ01668 2161 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 NAV2Q8IVL1 2488 aa12.06□□□□□ -0.48
HMGA1-203ENST00000374116 TCAPO15273 167 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
HMGA1-203ENST00000374116 IFNA21P01568 189 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 APLNRP35414 380 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 NPBWR2P48146 333 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 UCP3P55916 312 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 KRTAP10-9P60411 292 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 NUTF2P61970 127 aaKnown RBP12.05□□□□□ -0.48
HMGA1-203ENST00000374116 TLE4Q04727 773 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 MKXQ8IYA7 352 aa12.05□□□□□ -0.48
HMGA1-203ENST00000374116 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms