RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 C9orf106Q8NAJ2 232 aa15.24■□□□□ 0.03
CD40-201ENST00000372276 PSENENQ9NZ42 101 aa15.24■□□□□ 0.03
CD40-201ENST00000372276 OR14J1Q9UGF5 321 aa15.24■□□□□ 0.03
CD40-201ENST00000372276 DOCK7Q96N67 2140 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 MT-ND4LP03901 98 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 EPHA1P21709 976 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 MPV17P39210 176 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 RAB13P51153 203 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 ERVS71-1P61550 626 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 SERF2P84101 59 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 ODF3L1Q8IXM7 274 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 PPP1R35Q8TAP8 253 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 RPS10P5Q9NQ39 176 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 TINAGQ9UJW2 476 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 WASF3Q9UPY6 502 aa15.23■□□□□ 0.03
CD40-201ENST00000372276 KLF2Q9Y5W3 355 aaPredicted RBP15.23■□□□□ 0.03
CD40-201ENST00000372276 COLCA2A8K830 154 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 C1QL1O75973 258 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 HSPB1P04792 205 aaKnown RBP15.22■□□□□ 0.03
CD40-201ENST00000372276 FHITP49789 147 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 RAB5BP61020 215 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 ATP6V1FQ16864 119 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 ZNF585BQ52M93 769 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 ZNF66Q6ZN08 573 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 C11orf53Q8IXP5 236 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 OR10G4Q8NGN3 311 aa15.22■□□□□ 0.03
CD40-201ENST00000372276 PINX1Q96BK5 328 aaKnown RBP15.22■□□□□ 0.03
CD40-201ENST00000372276 CEP250Q9BV73 2442 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 C7orf77A4D0Y5 90 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 MBD3L4A6NDZ8 208 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 MBD3L3A6NE82 208 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 MBD3L5A6NJ08 208 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 TM4SF5O14894 197 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 MLNRO43193 412 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 IGKV1-39P01597 117 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 IGKV1D-39P04432 117 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 ADH4P08319 380 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 NFYBP25208 207 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 HOXA1P49639 335 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 ALKBH6Q3KRA9 238 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 SP5Q6BEB4 398 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 IGFL3Q6UXB1 125 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 BHLHA15Q7RTS1 189 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 PRR18Q8N4B5 295 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 TMEM217Q8N7C4 229 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 MBD3L2Q8NHZ7 208 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 GPHA2Q96T91 129 aa15.21■□□□□ 0.03
CD40-201ENST00000372276 ZNF71Q9NQZ8 489 aaPredicted RBP15.21■□□□□ 0.03
CD40-201ENST00000372276 A0A0G2JRQ6 117 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 OR5H1A6NKK0 313 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 A6NLC8 198 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 H0YL77 283 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 M0R036 132 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 IGKV1-5P01602 117 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 CECR9P0C854 216 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 CFHR2P36980 270 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 ASCL1P50553 236 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 KHDC3LQ587J8 217 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 AWAT1Q58HT5 328 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 ZNF506Q5JVG8 444 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 VWA1Q6PCB0 445 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 SPSB3Q6PJ21 355 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 FGFRL1Q8N441 504 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 CD300LFQ8TDQ1 290 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 RXFP4Q8TDU9 374 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 TAAR6Q96RI8 345 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 RAB9BQ9NP90 201 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 FBXO7Q9Y3I1 522 aa15.21■□□□□ 0.02
CD40-201ENST00000372276 CACNA1GO43497 2377 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 SPAARA0A1B0GVQ0 90 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 C12orf77C9JDV5 145 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 IFNA4P05014 189 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 ZNF16P17020 682 aaPredicted RBP15.2■□□□□ 0.02
CD40-201ENST00000372276 PPP1CCP36873 323 aaKnown RBP15.2■□□□□ 0.02
CD40-201ENST00000372276 OR3A1P47881 315 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 HTD2P86397 168 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 WDR82Q6UXN9 313 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 CIB3Q96Q77 187 aaPredicted RBP15.2■□□□□ 0.02
CD40-201ENST00000372276 HSD17B10Q99714 261 aaKnown RBP15.2■□□□□ 0.02
CD40-201ENST00000372276 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.2■□□□□ 0.02
CD40-201ENST00000372276 TIMM9Q9Y5J7 89 aa15.2■□□□□ 0.02
CD40-201ENST00000372276 IGHV2OR16-5A0A0B4J2B6 119 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 MEX3AA1L020 520 aaKnown RBP15.19■□□□□ 0.02
CD40-201ENST00000372276 C1orf196B1AJZ1 125 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 SPINT2O43291 252 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 PSPNO60542 156 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 CGAP01215 116 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 HBZP02008 142 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 CRYBA1P05813 215 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 DEFB109BQ30KR1 87 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 Q6ZRM9 215 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 CXorf67Q86X51 503 aaPredicted RBP15.19■□□□□ 0.02
CD40-201ENST00000372276 THNSL2Q86YJ6 484 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 ZNF561Q8N587 486 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 EDARADDQ8WWZ3 215 aa15.19■□□□□ 0.02
CD40-201ENST00000372276 AGFG2O95081 481 aa15.18■□□□□ 0.02
CD40-201ENST00000372276 PTBP3O95758 552 aaKnown RBP15.18■□□□□ 0.02
CD40-201ENST00000372276 SNRNP70P08621 437 aaKnown RBP15.18■□□□□ 0.02
CD40-201ENST00000372276 GZMHP20718 246 aa15.18■□□□□ 0.02
CD40-201ENST00000372276 UBE2KP61086 200 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms