RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SLC25A38Q96DW6 304 aa16.97■□□□□ 0.31
LMO4-202ENST00000370544 SNX22Q96L94 193 aa16.97■□□□□ 0.31
LMO4-202ENST00000370544 RCC1P18754 421 aaPredicted RBP16.97■□□□□ 0.31
LMO4-202ENST00000370544 C19orf57Q0VDD7 668 aa16.97■□□□□ 0.31
LMO4-202ENST00000370544 FAM74A3Q4VXF1 159 aa16.97■□□□□ 0.31
LMO4-202ENST00000370544 FAM222BQ8WU58 562 aa16.97■□□□□ 0.31
LMO4-202ENST00000370544 LOC101059948A0A1B0GTJ6 334 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 BRWD1Q9NSI6 2320 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 HELTA6NFD8 242 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 COL8A1P27658 744 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 RPL30P62888 115 aaKnown RBP16.96■□□□□ 0.31
LMO4-202ENST00000370544 ISOC2Q96AB3 205 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 KCNAB3O43448 404 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 PRDM14Q9GZV8 571 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 TMEM222Q9H0R3 208 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 NINQ8N4C6 2090 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 OR2T8A6NH00 312 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 CD1BP29016 333 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 CEBPDP49716 269 aaPredicted RBP16.96■□□□□ 0.31
LMO4-202ENST00000370544 RGP1Q92546 391 aaPredicted RBP16.96■□□□□ 0.31
LMO4-202ENST00000370544 CISD1Q9NZ45 108 aaKnown RBP16.96■□□□□ 0.31
LMO4-202ENST00000370544 GPR132Q9UNW8 380 aa16.96■□□□□ 0.31
LMO4-202ENST00000370544 EGR4Q05215 589 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 PPP1R32Q7Z5V6 425 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 SRD5A3Q9H8P0 318 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 PIN1P1O15428 100 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 COX5BP10606 129 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 SLC2A8Q9NY64 477 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 WNT5AP41221 380 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 RNF151Q2KHN1 245 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 TMEM54Q969K7 222 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 RSRP1Q9BUV0 290 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 WNT5BQ9H1J7 359 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 SIPA1L1O43166 1804 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 CASP8AP2Q9UKL3 1982 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 IGKV3-7A0A075B6H7 116 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 DHRS7CA6NNS2 312 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 DEDDO75618 318 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 ORM1P02763 201 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 GAPDHP04406 335 aaKnown RBP16.95■□□□□ 0.3
LMO4-202ENST00000370544 LINC01590Q5TEZ4 76 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 J3KRW8 73 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 MFNGO00587 321 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 PRF1P14222 555 aa16.95■□□□□ 0.3
LMO4-202ENST00000370544 SF3B6Q9Y3B4 125 aaKnown RBP16.95■□□□□ 0.3
LMO4-202ENST00000370544 H3BQ15 152 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 OR1L6Q8NGR2 347 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 MRPL30Q8TCC3 161 aaKnown RBP16.94■□□□□ 0.3
LMO4-202ENST00000370544 OR5AC2Q9NZP5 309 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 HIGD1AQ9Y241 93 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 C7orf77A4D0Y5 90 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 LINC00862A6NCI5 91 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 C17orf51A8MQB3 221 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 TMEM229AB2RXF0 380 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 SNCGO76070 127 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 MMP9P14780 707 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 COX19Q49B96 90 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 CRISP2P16562 243 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 TMEM183BQ1AE95 376 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 TMEM97Q5BJF2 176 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 C16orf82Q7Z2V1 217 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 CBLN2Q8IUK8 224 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 GHITMQ9H3K2 345 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 KLF14Q8TD94 323 aaPredicted RBP16.94■□□□□ 0.3
LMO4-202ENST00000370544 DLL3Q9NYJ7 618 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 HILPDAQ9Y5L2 63 aa16.94■□□□□ 0.3
LMO4-202ENST00000370544 UNQ9370/PRO34162Q6UXP9 181 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 IL22RA2Q969J5 263 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 CSN3P07498 182 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 PGA5P0DJD9 388 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 RIGQ13278 110 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 SHISA5Q8N114 240 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 WASHC3Q9Y3C0 194 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 CLEC2AQ6UVW9 174 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 LILRB1Q8NHL6 650 aaPredicted RBP16.93■□□□□ 0.3
LMO4-202ENST00000370544 STARD4Q96DR4 205 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 CXCL2P19875 107 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 MC5RP33032 325 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 RPL27AP46776 148 aaKnown RBP16.93■□□□□ 0.3
LMO4-202ENST00000370544 TCTEX1D1Q8N7M0 179 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 NPVFQ9HCQ7 196 aa16.93■□□□□ 0.3
LMO4-202ENST00000370544 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 M0R2Z0 102 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 FAM87AP0C7U9 286 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 NAT2P11245 290 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 RBPMS2Q6ZRY4 209 aaKnown RBP16.92■□□□□ 0.3
LMO4-202ENST00000370544 SIRT7Q9NRC8 400 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 HSF4Q9ULV5 492 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 AP4M1O00189 453 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 CCKARP32238 428 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 C10orf128Q5T292 105 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 IFNL4K9M1U5 179 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 CYB5R3P00387 301 aaPredicted RBP16.92■□□□□ 0.3
LMO4-202ENST00000370544 SFXN3Q9BWM7 321 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 PGLYRP1O75594 196 aaPredicted RBP16.92■□□□□ 0.3
LMO4-202ENST00000370544 RUNX1Q01196 453 aa16.92■□□□□ 0.3
LMO4-202ENST00000370544 KCNMB1Q16558 191 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms