RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LHFPL5Q8TAF8 219 aa13.91□□□□□ -0.18
PHGDH-202ENST00000369409 NEU4Q8WWR8 484 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-202ENST00000369409 C19orf12Q9NSK7 152 aa13.91□□□□□ -0.18
PHGDH-202ENST00000369409 KAAG1Q9UBP8 84 aa13.91□□□□□ -0.18
PHGDH-202ENST00000369409 RNF150Q9ULK6 438 aa13.91□□□□□ -0.18
PHGDH-202ENST00000369409 HSPB11Q9Y547 144 aa13.91□□□□□ -0.18
PHGDH-202ENST00000369409 UBR5O95071 2799 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-202ENST00000369409 KBTBD11-OT1A0A1B0GTJ5 212 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 DVL1O14640 695 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 IGHV2-70P01814 119 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 AVPI1Q5T686 147 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 LGI3Q8N145 548 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 H1FXQ92522 213 aaKnown RBP13.9□□□□□ -0.18
PHGDH-202ENST00000369409 OR10C1Q96KK4 312 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 UBE2J1Q9Y385 318 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-202ENST00000369409 DOCK11Q5JSL3 2073 aa13.9□□□□□ -0.18
PHGDH-202ENST00000369409 COL12A1Q99715 3063 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 TRAV14DV4A0A0A6YYC5 116 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 hADV38S2A0JD32 116 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 H0Y980 276 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 NDUFA2O43678 99 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 DAOP14920 347 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 LOXL3P58215 753 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 RPL31P62899 125 aaKnown RBP13.89□□□□□ -0.19
PHGDH-202ENST00000369409 ZNF273Q14593 569 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 GGNBP1Q5YKI7 109 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 LRTM2Q8N967 370 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 PPP1R1CQ8WVI7 109 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 AKR1E2Q96JD6 320 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 RAB9BQ9NP90 201 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 COMMD9Q9P000 198 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 KLF2Q9Y5W3 355 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-202ENST00000369409 LINC00312Q9Y6C7 94 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 FXYD6-FXYD2A0A087WZ82 144 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 ZNF729A6NN14 1252 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-202ENST00000369409 F2RP25116 425 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 MORN2Q502X0 79 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 TMEM268Q5VZI3 342 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 LYZL2Q7Z4W2 148 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 CORO2AQ92828 525 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 C5orf30Q96GV9 206 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 C18orf12Q96KH6 178 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 NMES1Q9C002 83 aa13.89□□□□□ -0.19
PHGDH-202ENST00000369409 KMT2BQ9UMN6 2715 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-202ENST00000369409 SPTAN1Q13813 2472 aaKnown RBP13.88□□□□□ -0.19
PHGDH-202ENST00000369409 IFNA21P01568 189 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 IGHV3-7P01780 117 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 UCP1P25874 307 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 SRPXP78539 464 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 MEF2CQ06413 473 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-202ENST00000369409 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 ABHD14BQ96IU4 210 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 GFOD1Q9NXC2 390 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 USF3Q68DE3 2245 aa13.88□□□□□ -0.19
PHGDH-202ENST00000369409 YPEL1O60688 119 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 SRSF1Q07955 248 aaKnown RBP eCLIP13.87□□□□□ -0.192e-10■■■□□ 18.2
PHGDH-202ENST00000369409 FGL1Q08830 312 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 UTF1Q5T230 341 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 PRAMEF5Q5TYX0 476 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 LEAP2Q969E1 77 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 C2orf50Q96LR7 162 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 YPEL2Q96QA6 119 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 IDI2-AS1Q9NZ38 188 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 PPIHO43447 177 aaKnown RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 GOSR1O95249 250 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 FSTL3O95633 263 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 CCL3L1P16619 93 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 ZNF16P17020 682 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 NFYBP25208 207 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 CYCSP99999 105 aaKnown RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 FAM219AQ8IW50 185 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 LIN7CQ9NUP9 197 aaKnown RBP13.87□□□□□ -0.19
PHGDH-202ENST00000369409 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
PHGDH-202ENST00000369409 ARPC5O15511 151 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 NDUFS7O75251 213 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 MMP23AO75900 390 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 Q3ZCU0 254 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 LGALSLQ3ZCW2 172 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-202ENST00000369409 BTNL3Q6UXE8 466 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
PHGDH-202ENST00000369409 TIMD4Q96H15 378 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 ZNF714Q96N38 554 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 AGMATQ9BSE5 352 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 GAL3ST2Q9H3Q3 398 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 LINC00574Q9H8X3 128 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 TAS2R3Q9NYW6 316 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 LPAR3Q9UBY5 353 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 ARID1AO14497 2285 aa13.86□□□□□ -0.19
PHGDH-202ENST00000369409 SLC31A2O15432 143 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms