RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 C13orf42A0A1B0GVH6 325 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 A6NNC1 897 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 ERP29P30040 261 aaKnown RBP11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 CDKN1AP38936 164 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 LINC00205P59089 165 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 ZNF273Q14593 569 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 LGALSLQ3ZCW2 172 aaPredicted RBP11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 AVPI1Q5T686 147 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 DTX2Q86UW9 622 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 SHPKQ9UHJ6 478 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 ZNF134P52741 427 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 RND3P61587 244 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 LRRC37A5PQ49AS3 106 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 C1orf87Q8N0U7 546 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 BVESQ8NE79 360 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 MED13LQ71F56 2210 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 SLC31A2O15432 143 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 KCNAB3O43448 404 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 ADAM20O43506 726 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 NDUFB7P17568 137 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 CXCL2P19875 107 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 COQ8AQ8NI60 647 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 HYLS1Q96M11 299 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 HSPB11Q9Y547 144 aa11.65□□□□□ -0.54
HMGCS2-201ENST00000369406 ST8SIA5O15466 376 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 SSTR2P30874 369 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 HFEQ30201 348 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 C1orf229Q6ZS94 237 aaPredicted RBP11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 C18orf12Q96KH6 178 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 FAM234AQ9H0X4 552 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 RANBP3Q9H6Z4 567 aaPredicted RBP11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 RAB18Q9NP72 206 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 KCNS2Q9ULS6 477 aa11.65□□□□□ -0.55
HMGCS2-201ENST00000369406 POLQO75417 2590 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 IGHV2-70P01814 119 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 EIF4EBP1Q13541 118 aaPredicted RBP11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 OR51H1Q8NH63 302 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 PPP1R1CQ8WVI7 109 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 OR2D2Q9H210 308 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 F2RL2O00254 374 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 DVL1O14640 695 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 PROP1O75360 226 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 CCL3L1P16619 93 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 IL15RAQ13261 267 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 GGNBP1Q5YKI7 109 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 LPCAT3Q6P1A2 487 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 BTNL3Q6UXE8 466 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 TMEM222Q9H0R3 208 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
HMGCS2-201ENST00000369406 H0YIZ8 118 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 SPINT2O43291 252 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 RPL30P62888 115 aaKnown RBP11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 HTD2P86397 168 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 CCDC71LQ8N9Z2 235 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 PSG11Q9UQ72 335 aa11.63□□□□□ -0.55
HMGCS2-201ENST00000369406 FXYD6-FXYD2A0A087WZ82 144 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 IGKV1-39P01597 117 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 IGKV1D-39P04432 117 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 GZMHP20718 246 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 BRWD1-AS2P59051 145 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 MORN2Q502X0 79 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 GSG1LQ6UXU4 331 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 LRTM2Q8N967 370 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 METTL8Q9H825 291 aaKnown RBP11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 OR6C3Q9NZP0 311 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 F2RP25116 425 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 TMEM268Q5VZI3 342 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 ZNF841Q6ZN19 808 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 SELENOHQ8IZQ5 122 aaKnown RBP11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 SUCNR1Q9BXA5 334 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 NCOR1P1Q9H4R4 102 aa11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 RBM7Q9Y580 266 aaKnown RBP11.62□□□□□ -0.55
HMGCS2-201ENST00000369406 DAOP14920 347 aa11.61□□□□□ -0.55
HMGCS2-201ENST00000369406 TRAT1Q6PIZ9 186 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms