RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 GFOD1Q9NXC2 390 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 RBM7Q9Y580 266 aaKnown RBP19.69■□□□□ 0.74
SNX3-203ENST00000368979 DBX1A6NMT0 343 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 MPPED1O15442 326 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 IFNA2P01563 188 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 COL8A1P27658 744 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 ANKRD55Q3KP44 614 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 CMTM1Q8IZ96 169 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 OR10A7Q8NGE5 316 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 OR52M1Q8NGK5 317 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 AKR1E2Q96JD6 320 aa19.68■□□□□ 0.74
SNX3-203ENST00000368979 GOSR2O14653 212 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 ANXA3P12429 323 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 CCL3L1P16619 93 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 WDR25Q64LD2 544 aaPredicted RBP19.67■□□□□ 0.74
SNX3-203ENST00000368979 LIN54Q6MZP7 749 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 TBC1D26Q86UD7 250 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 COQ8AQ8NI60 647 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 EDARADDQ8WWZ3 215 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 ZNF436Q9C0F3 470 aaPredicted RBP19.67■□□□□ 0.74
SNX3-203ENST00000368979 KCNIP3Q9Y2W7 256 aa19.67■□□□□ 0.74
SNX3-203ENST00000368979 MMP23AO75900 390 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 SLC22A5O76082 557 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 RGS11O94810 467 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 DLX6P56179 175 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 MSMO1Q15800 293 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 LY6G6FQ5SQ64 297 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 PRAMEF5Q5TYX0 476 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 ZNF645Q8N7E2 425 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 OR2D2Q9H210 308 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 PRR13Q9NZ81 148 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 RPUSD1Q9UJJ7 312 aaKnown RBP19.66■□□□□ 0.74
SNX3-203ENST00000368979 KCNS2Q9ULS6 477 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 ITGB1BP1O14713 200 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 PGLYRP1O75594 196 aaPredicted RBP19.66■□□□□ 0.74
SNX3-203ENST00000368979 OR5AC1P0C628 307 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 HLA-GP17693 338 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 TMEM187Q14656 261 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 HEPN1Q6WQI6 88 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 DRAM1Q8N682 238 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 C8orf46Q8TAG6 207 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 AGMATQ9BSE5 352 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 SUCNR1Q9BXA5 334 aa19.66■□□□□ 0.74
SNX3-203ENST00000368979 DCHS2Q6V1P9 2916 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 C3orf85A0A1B0GTC6 90 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 S100GP29377 79 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 PDLIM4P50479 330 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 UTF1Q5T230 341 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 KCTD9Q7L273 389 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 OR5M8Q8NGP6 311 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 C5orf30Q96GV9 206 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 NARFLQ9H6Q4 476 aa19.65■□□□□ 0.74
SNX3-203ENST00000368979 ST8SIA5O15466 376 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 TNFSF12O43508 249 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 OR2A4O95047 310 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 PAX1P15863 534 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 H2BFSP57053 126 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 SP6Q3SY56 376 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 ZBTB34Q8NCN2 500 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 ZNF439Q8NDP4 499 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 DMRTB1Q96MA1 342 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 OR2A7Q96R45 310 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 TP53RKQ96S44 253 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 GPHA2Q96T91 129 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 BARX1Q9HBU1 254 aaPredicted RBP19.64■□□□□ 0.73
SNX3-203ENST00000368979 PIPOXQ9P0Z9 390 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 RNF150Q9ULK6 438 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 PSG11Q9UQ72 335 aa19.64■□□□□ 0.73
SNX3-203ENST00000368979 SIX6O95475 246 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 GIPP09681 153 aaPredicted RBP19.63■□□□□ 0.73
SNX3-203ENST00000368979 ZNF134P52741 427 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 DCAF12L2Q5VW00 463 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 GLYATL2Q8WU03 294 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 NRGNQ92686 78 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 PSMG3-AS1Q96PY0 264 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 BPESC1Q9GZL8 116 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 LRRK2Q5S007 2527 aa19.63■□□□□ 0.73
SNX3-203ENST00000368979 SPTAN1Q13813 2472 aaKnown RBP19.62■□□□□ 0.73
SNX3-203ENST00000368979 PHF1O43189 567 aaPredicted RBP19.62■□□□□ 0.73
SNX3-203ENST00000368979 NFYBP25208 207 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 GNB2P62879 340 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 EIF4EBP1Q13541 118 aaPredicted RBP19.62■□□□□ 0.73
SNX3-203ENST00000368979 LRTM2Q8N967 370 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 LEAP2Q969E1 77 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 MSI2Q96DH6 328 aaKnown RBP19.62■□□□□ 0.73
SNX3-203ENST00000368979 SSBP3Q9BWW4 388 aaPredicted RBP19.62■□□□□ 0.73
SNX3-203ENST00000368979 IFI27L2Q9H2X8 130 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 RAB18Q9NP72 206 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 USF3Q68DE3 2245 aa19.62■□□□□ 0.73
SNX3-203ENST00000368979 C17orf98A8MV24 154 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 H0Y980 276 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 CCSO14618 274 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 SLC31A2O15432 143 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 F2RP25116 425 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 ATP5J2P56134 94 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 ERVFRD-1P60508 538 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 ZNF787Q6DD87 383 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 LIAT1Q6ZQX7 453 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 C11orf42Q8N5U0 333 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 LY6G5BQ8NDX9 201 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms