RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 ZNF880Q6PDB4 577 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 SVOPQ8N4V2 548 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 FAM89BQ8N5H3 189 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 LPAR5Q9H1C0 372 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 RIMS4Q9H426 269 aaPredicted RBP18.64■□□□□ 0.57
SHC1-201ENST00000366442 ACOT13Q9NPJ3 140 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 PLEKHJ1Q9NW61 149 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 ABRACLQ9P1F3 81 aa18.64■□□□□ 0.57
SHC1-201ENST00000366442 SLC6A1P30531 599 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 MAP2K4P45985 399 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 RPL23AP62750 156 aaKnown RBP18.63■□□□□ 0.57
SHC1-201ENST00000366442 P2RY14Q15391 338 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 RAB11BQ15907 218 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 MOB1BQ7L9L4 216 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 C5orf24Q7Z6I8 188 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 ODF3L1Q8IXM7 274 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 FAM71E2Q8N5Q1 922 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 PHF21AQ96BD5 680 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 CNBD2Q96M20 576 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 GON7Q9BXV9 100 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 ZFP57Q9NU63 452 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 NECAP2Q9NVZ3 263 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 LINC00527Q9UJ94 153 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 RAB26Q9ULW5 256 aa18.63■□□□□ 0.57
SHC1-201ENST00000366442 AK6Q9Y3D8 172 aaKnown RBP18.63■□□□□ 0.57
SHC1-201ENST00000366442 TRBV6-6A0A0A6YYG2 114 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 ERICH4A6NGS2 130 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 LINC01548A6NM66 108 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 CALRP27797 417 aaKnown RBP18.62■□□□□ 0.57
SHC1-201ENST00000366442 FABP5Q01469 135 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 ZNF367Q7RTV3 350 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 OR2AK2Q8NG84 335 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 OR51D1Q8NGF3 324 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 RASL11BQ9BPW5 248 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 HSF4Q9ULV5 492 aa18.62■□□□□ 0.57
SHC1-201ENST00000366442 IGLL1P15814 213 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 PSMD7P51665 324 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 F2RL1P55085 397 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 Q6ZPA2 131 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 ZNF833PQ6ZTB9 187 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 RCC1LQ96I51 464 aaKnown RBP18.61■□□□□ 0.57
SHC1-201ENST00000366442 CHMP1AQ9HD42 196 aaPredicted RBP18.61■□□□□ 0.57
SHC1-201ENST00000366442 STEAP1Q9UHE8 339 aa18.61■□□□□ 0.57
SHC1-201ENST00000366442 FOXI3A8MTJ6 420 aaPredicted RBP18.6■□□□□ 0.57
SHC1-201ENST00000366442 SOCS1O15524 211 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 DUS4LO95620 317 aaKnown RBP18.6■□□□□ 0.57
SHC1-201ENST00000366442 FAM71F2Q6NXP2 309 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 TEX38Q6PEX7 206 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 IL1F10Q8WWZ1 152 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 MGAT4AQ9UM21 535 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 V9GY05 133 aa18.6■□□□□ 0.57
SHC1-201ENST00000366442 PRB2P02812 416 aaPredicted RBP18.59■□□□□ 0.57
SHC1-201ENST00000366442 SOX6P35712 828 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 PNLIPRP3Q17RR3 467 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 FAM3DQ96BQ1 224 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 NABP2Q9BQ15 211 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 MRPL20Q9BYC9 149 aaKnown RBP18.59■□□□□ 0.57
SHC1-201ENST00000366442 IFI27L2Q9H2X8 130 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 AK3Q9UIJ7 227 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 ZNF580Q9UK33 172 aa18.59■□□□□ 0.57
SHC1-201ENST00000366442 SAA2-SAA4A0A096LPE2 208 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 RRP9O43818 475 aaKnown RBP18.58■□□□□ 0.56
SHC1-201ENST00000366442 SAA2P0DJI9 122 aaPredicted RBP18.58■□□□□ 0.56
SHC1-201ENST00000366442 SSX1Q16384 188 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 FOXB2Q5VYV0 432 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 ETV3LQ6ZN32 361 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 LINC00482Q8N8I6 264 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 PIPOXQ9P0Z9 390 aa18.58■□□□□ 0.56
SHC1-201ENST00000366442 ITGB1BP1O14713 200 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 LDLRAD4O15165 306 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 MRPS14O60783 128 aaKnown RBP18.57■□□□□ 0.56
SHC1-201ENST00000366442 OR3A3P47888 321 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 THBS3P49746 956 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 TMEM50BP56557 158 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 MMDQ15546 238 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 C2orf76Q3KRA6 126 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 RNF152Q8N8N0 203 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 SETD6Q8TBK2 473 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 HSPB9Q9BQS6 159 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 GHITMQ9H3K2 345 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 C12orf4Q9NQ89 552 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 NDUFB11Q9NX14 153 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 SLC23A1Q9UHI7 598 aa18.57■□□□□ 0.56
SHC1-201ENST00000366442 TRAV1-2A0A0B4J238 106 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 IGF1P05019 195 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 VEGFCP49767 419 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 CLDN12P56749 244 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 GABARAPL2P60520 117 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 ACTBP60709 375 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 FOXE3Q13461 319 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 CD200R1LQ6Q8B3 271 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 MRPL41Q8IXM3 137 aaKnown RBP18.56■□□□□ 0.56
SHC1-201ENST00000366442 OR56B1Q8NGI3 324 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 RBMXL1Q96E39 390 aaKnown RBP18.56■□□□□ 0.56
SHC1-201ENST00000366442 ARHGAP5-AS1Q96IT6 56 aa18.56■□□□□ 0.56
SHC1-201ENST00000366442 HDHD3Q9BSH5 251 aaPredicted RBP18.56■□□□□ 0.56
SHC1-201ENST00000366442 AURKAIP1Q9NWT8 199 aaPredicted RBP18.56■□□□□ 0.56
SHC1-201ENST00000366442 NUDT19A8MXV4 375 aa18.55■□□□□ 0.56
SHC1-201ENST00000366442 PDCD5O14737 125 aa18.55■□□□□ 0.56
SHC1-201ENST00000366442 RAB29O14966 203 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms