RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 LRRC75BQ2VPJ9 315 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 FBXW9Q5XUX1 488 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM211Q6ICI0 200 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 LHFPL2Q6ZUX7 228 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 CADM4Q8NFZ8 388 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PSMF1Q92530 271 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 GABRG3Q99928 467 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PSMG3Q9BT73 122 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 ULBP2Q9BZM5 246 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 WDR61Q9GZS3 305 aaKnown RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 GAL3ST2Q9H3Q3 398 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 FCN1O00602 326 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PGLYRP1O75594 196 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DL1P43626 348 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 AMTP48728 403 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 YPEL5P62699 121 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 LCN2P80188 198 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PRAMEF20Q5VT98 475 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 UNQ5815/PRO19632Q6UWF5 114 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 SLC22A18ASQ8N1D0 253 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 ERRFI1Q9UJM3 462 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 RNF115Q9Y4L5 304 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 KIAA0100Q14667 2235 aaKnown RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 CACNA1DQ01668 2161 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 NPIPB13A6NJU9 1138 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 NPIPB4C9JG80 1138 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 ZNHIT1O43257 154 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 NTF3P20783 257 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 F2RP25116 425 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 SOX8P57073 446 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 TPTE2P1Q5T6R2 138 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 SP5Q6BEB4 398 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 DEFB119Q8N690 84 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF611Q8N823 705 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 LMX1AQ8TE12 382 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 MRGPRX1Q96LB2 322 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 AGMATQ9BSE5 352 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 PARD6GQ9BYG4 376 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-201ENST00000352993 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
BRCA1-201ENST00000352993 LOC102725191A0A1B0GVB3 256 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 HS3ST1O14792 307 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 CBR3O75828 277 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 CAPZBP47756 277 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 RBM11P57052 281 aaKnown RBP6.52□□□□□ -1.37
BRCA1-201ENST00000352993 RBX1P62877 108 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 HTD2P86397 168 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 Q6ZRM9 215 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 DERL1Q9BUN8 251 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
BRCA1-201ENST00000352993 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 URB1O60287 2271 aaKnown RBP6.52□□□□□ -1.37
BRCA1-201ENST00000352993 A0A1W2PQF6 199 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 DHHO43323 396 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TUSC2O75896 110 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 COX5AP20674 150 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 IER3P46695 156 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TGFBR3Q03167 851 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 HLA-BQ31612 363 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 RTL10Q7L3V2 364 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 RDH5Q92781 318 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 GPR27Q9NS67 375 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 UQCR10Q9UDW1 63 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TRAV39A0A0B4J263 110 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 A0A1W2PPV4 95 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 H0Y980 276 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 WDR1O75083 606 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 NAPSAO96009 420 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 KRASP01116 189 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TYMSP04818 313 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TDGF1P13385 188 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 CD38P28907 300 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 KLF3P57682 345 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-201ENST00000352993 KIAA1644Q3SXP7 199 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 PHYHD1Q5SRE7 291 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TEX43Q6ZNM6 134 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 TMPRSS7Q7RTY8 843 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF738Q8NE65 137 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 OR4B1Q8NGF8 309 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 RLN3Q8WXF3 142 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
BRCA1-201ENST00000352993 GTF3C1Q12789 2109 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 F2Z2F3 143 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 SIRPB1O00241 398 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 IGHEP01854 428 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 CA3P07451 260 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 ATP5G3P48201 142 aa6.51□□□□□ -1.37
BRCA1-201ENST00000352993 UBE2NP61088 152 aaKnown RBP6.51□□□□□ -1.37
BRCA1-201ENST00000352993 RPL15P61313 204 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms