RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PHYHIPQ92561 330 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 P2RX4Q99571 388 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 SULT4A1Q9BR01 284 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 KCNK15Q9H427 330 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 PLGRKTQ9HBL7 147 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.85
SGCA-202ENST00000344627 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 LRRC42Q9Y546 428 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 LANCL1O43813 399 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
SGCA-202ENST00000344627 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
SGCA-202ENST00000344627 VDAC1P21796 283 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 CHATP28329 748 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 HTR2CP28335 458 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 BLVRBP30043 206 aaPredicted RBP9.76□□□□□ -0.85
SGCA-202ENST00000344627 HSPA13P48723 471 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 ZNF137PP52743 207 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 RPS27AP62979 156 aaKnown RBP9.76□□□□□ -0.85
SGCA-202ENST00000344627 P2RY14Q15391 338 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 MMDQ15546 238 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 STEAP3Q658P3 488 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 ETV3LQ6ZN32 361 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 ZNF695Q8IW36 515 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 OR2AK2Q8NG84 335 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 OR8U1Q8NH10 309 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 MRPL20Q9BYC9 149 aaKnown RBP9.76□□□□□ -0.85
SGCA-202ENST00000344627 PLSCR3Q9NRY6 295 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 STEAP1Q9UHE8 339 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
SGCA-202ENST00000344627 CCL24O00175 119 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 RGS10O43665 173 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 BPNT1O95861 308 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 ELANEP08246 267 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 OR3A3P47888 321 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
SGCA-202ENST00000344627 HTD2P86397 168 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 LSAMPQ13449 338 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 KIR2DS1Q14954 304 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 C1orf100Q5SVJ3 147 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 ZNF554Q86TJ5 538 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 HSPB9Q9BQS6 159 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 ZNF251Q9BRH9 671 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 NICN1Q9BSH3 213 aa9.75□□□□□ -0.85
SGCA-202ENST00000344627 URM1Q9BTM9 101 aaKnown RBP9.75□□□□□ -0.85
SGCA-202ENST00000344627 ZNF107Q9UII5 783 aaPredicted RBP9.75□□□□□ -0.85
SGCA-202ENST00000344627 LSM2Q9Y333 95 aaKnown RBP9.75□□□□□ -0.85
SGCA-202ENST00000344627 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
SGCA-202ENST00000344627 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 YPEL1O60688 119 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 UCHL1P09936 223 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 ARSBP15848 533 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 INSL3P51460 131 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 RPS25P62851 125 aaKnown RBP9.74□□□□□ -0.85
SGCA-202ENST00000344627 UNC119Q13432 240 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 FOXE3Q13461 319 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 OR6M1Q8NGM8 313 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 NRG4Q8WWG1 115 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 YPEL2Q96QA6 119 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 TM2D1Q9BX74 207 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 WSB1Q9Y6I7 421 aa9.74□□□□□ -0.85
SGCA-202ENST00000344627 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
SGCA-202ENST00000344627 SAA2-SAA4A0A096LPE2 208 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 SLC22A1O15245 554 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 SOCS1O15524 211 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 HSPA12AO43301 675 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 SAA2P0DJI9 122 aaPredicted RBP9.73□□□□□ -0.85
SGCA-202ENST00000344627 CNTFRP26992 372 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
SGCA-202ENST00000344627 ACTBP60709 375 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 IRF3Q14653 427 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 TRAM1Q15629 374 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 HMGN3Q15651 99 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 RAB11BQ15907 218 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 TMEM65Q6PI78 240 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 FAM71E2Q8N5Q1 922 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 RAX2Q96IS3 184 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 KCTD7Q96MP8 289 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 NABP2Q9BQ15 211 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 SLC23A1Q9UHI7 598 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 AK3Q9UIJ7 227 aa9.73□□□□□ -0.85
SGCA-202ENST00000344627 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 TMEM14DPA8MWL7 114 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 SLC17A2O00624 439 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 RAB29O14966 203 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 GSTP1P09211 210 aaKnown RBP9.72□□□□□ -0.85
SGCA-202ENST00000344627 MAP2K4P45985 399 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 VEGFCP49767 419 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms