RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 B5MCH6 92 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 HHLA1C9JL84 531 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 EDN1P05305 212 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ACVRL1P37023 503 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 PFN3P60673 137 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 TMEM187Q14656 261 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ITPRIPL2Q3MIP1 535 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ADOQ96SZ5 270 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 DUSP13Q9UII6 198 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 CENPVL3A0A0U1RRI6 287 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 PLPP3O14495 311 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ZIC2O95409 532 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ZFP36L1Q07352 338 aaKnown RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 RTL8BQ17RB0 113 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 GAGE13Q4V321 117 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 DCAF12Q5T6F0 453 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 MORN3Q6PF18 240 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 RNF183Q96D59 192 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 NDFIP1Q9BT67 221 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SH3BGRL3Q9H299 93 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 IFI27L2Q9H2X8 130 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 GNB4Q9HAV0 340 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OR1A1Q9P1Q5 309 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 CXorf51AA0A1B0GTR3 108 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ITGBL1O95965 494 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 CELA3AP09093 270 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 FUT1P19526 365 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 NTF3P20783 257 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF136P52737 540 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 TIGITQ495A1 244 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SHISA6Q6ZSJ9 500 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OR8B12Q8NGG6 310 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SARAFQ96BY9 339 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 ABHD17AQ96GS6 310 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 LYRM4Q9HD34 91 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 A0A1B0GVT2 93 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OTOL1A6NHN0 477 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 LIPT2A6NK58 231 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 UPK3AO75631 287 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 CXorf1O96002 111 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 UCNP55089 124 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 GFRA1P56159 465 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 TAL2Q16559 108 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 MMD2Q8IY49 270 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SUMF1Q8NBK3 374 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SDF2Q99470 211 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 VGLL1Q99990 258 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SPANXB1Q9NS25 103 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 RPRMQ9NS64 109 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 HEBP2Q9Y5Z4 205 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 C9JCJ5 164 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 C11orf94C9JXX5 98 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 H3BMG7 143 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 CLRN1P58418 232 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 KLF5Q13887 457 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 PTCRAQ6ISU1 281 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 PPDPFLQ8WWR9 84 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 Q96M85 177 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 OR10A2Q9H208 303 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TAAR2Q9P1P5 351 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TRAV8-6A0A0B4J262 113 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 CLDN5O00501 218 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 HMGN2P05204 90 aaKnown RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 PIRTP0C851 137 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 IGFBP3P17936 291 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 EMP1P54849 157 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 LINC01559Q495D7 138 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TPRX1Q8N7U7 411 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 FGF14Q92915 247 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 C18orf12Q96KH6 178 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 SGK494Q96LW2 274 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF665Q9H7R5 613 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 BPIFA1Q9NP55 256 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 HCFC1R1Q9NWW0 138 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 RNF115Q9Y4L5 304 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 LY75O60449 1722 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 GRIFINA4D1Z8 144 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 FABP5P3A8MUU1 101 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 CEACAM4O75871 244 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 COX8AP10176 69 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 IGLL1P15814 213 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TNFRSF1AP19438 455 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 ADCYAP1R1P41586 468 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 GPR1P46091 355 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF83P51522 516 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 SRSF1Q07955 248 aaKnown RBP eCLIP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 PRR30Q53SZ7 412 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 FAM219BQ5XKK7 198 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 OR10J6PQ8NGY7 276 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 EMID1Q96A84 441 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TNFRSF13CQ96RJ3 184 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 NXF5Q9H1B4 397 aaKnown RBP3.56□□□□□ -1.84
NEDD4-201ENST00000338963 CXCL16Q9H2A7 254 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 TAS2R4Q9NYW5 299 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 R4GMQ9 66 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 PTPRFP10586 1907 aa3.56□□□□□ -1.84
NEDD4-201ENST00000338963 NHSQ6T4R5 1651 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms