RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HIST1H1BP16401 226 aaKnown RBP12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OR3A1P47881 315 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OR10P1Q8NGE3 313 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 VAX2Q9UIW0 290 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 SLC25A6P12236 298 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
PCDH8-201ENST00000338862 OR2W1Q9Y3N9 320 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
PCDH8-201ENST00000338862 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 BAGE3Q86Y29 109 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 APH1AQ96BI3 265 aa12.09□□□□□ -0.47
PCDH8-201ENST00000338862 TRAV38-1A0A0B4J264 116 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 ACTL6BO94805 426 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF506Q5JVG8 444 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 TMEM18Q96B42 140 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 RAB40CQ96S21 281 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 DUSP23Q9BVJ7 150 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 TRAPPC1Q9Y5R8 145 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 CACNA1HO95180 2353 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 LILRA1O75019 489 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 CST2P09228 141 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 PCOLCEQ15113 449 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 H2BFWTQ7Z2G1 175 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 MRGPRDQ8TDS7 321 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 PITPNC1Q9UKF7 332 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
PCDH8-201ENST00000338862 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
PCDH8-201ENST00000338862 WNT5AP41221 380 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 STARD6P59095 220 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 EXT1Q16394 746 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 DMRTC2Q8IXT2 367 aaPredicted RBP12.08□□□□□ -0.48
PCDH8-201ENST00000338862 OR2T10Q8NGZ9 312 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
PCDH8-201ENST00000338862 FABP6P51161 128 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF826PQ6ZT77 177 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 CDH20Q9HBT6 801 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 GNG12Q9UBI6 72 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 PAM16Q9Y3D7 125 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 CHD3Q12873 2000 aaKnown RBP12.07□□□□□ -0.48
PCDH8-201ENST00000338862 C1QTNF9BB2RNN3 333 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
PCDH8-201ENST00000338862 MEF2BQ02080 365 aaPredicted RBP12.07□□□□□ -0.48
PCDH8-201ENST00000338862 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 C10orf128Q5T292 105 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 VHLLQ6RSH7 139 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
PCDH8-201ENST00000338862 CADM4Q8NFZ8 388 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 PARLQ9H300 379 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 ZDHHC11Q9H8X9 412 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
PCDH8-201ENST00000338862 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 MPLP40238 635 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
PCDH8-201ENST00000338862 PRSS8Q16651 343 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 OR1P1Q8NH06 330 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 MDFIC2A0A1B0GVS7 189 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 GYPAP02724 150 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 PAX6P26367 422 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 FKBP2P26885 142 aaKnown RBP12.06□□□□□ -0.48
PCDH8-201ENST00000338862 PMELP40967 661 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 AESQ08117 197 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 Q3ZCU0 254 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 GCSAMLQ5JQS6 135 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 OR5D13Q8NGL4 314 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 PHF7Q9BWX1 381 aaPredicted RBP12.06□□□□□ -0.48
PCDH8-201ENST00000338862 TAAR3PQ9P1P4 343 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 ELOA3CA0A087WX78 387 aaPredicted RBP12.06□□□□□ -0.48
PCDH8-201ENST00000338862 AQP7O14520 342 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 NDUFB4O95168 129 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 TCL1AP56279 114 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF90Q03938 601 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 MSMO1Q15800 293 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms