RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 ARPC5LQ9BPX5 153 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 PARP12Q9H0J9 701 aaKnown RBP11.23□□□□□ -0.61
LMO1-201ENST00000335790 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 RAB9BQ9NP90 201 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 KCNJ16Q9NPI9 418 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 OR6C3Q9NZP0 311 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 GSKIPQ9P0R6 139 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 JPT1Q9UK76 154 aa11.23□□□□□ -0.61
LMO1-201ENST00000335790 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 RNF212BA8MTL3 300 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 K7EPK0 472 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 LGALS8O00214 317 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 TNFRSF13BO14836 293 aaPredicted RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 SIGLEC5O15389 551 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 YPEL1O60688 119 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 RLN2P04090 185 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 IRF2P14316 349 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 NUP62P37198 522 aaPredicted RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 CACNA1DQ01668 2161 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 SWI5Q1ZZU3 235 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 PRR18Q8N4B5 295 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 FAM71E2Q8N5Q1 922 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 BOLLQ8N9W6 283 aaKnown RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 OR8U1Q8NH10 309 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 LSM10Q969L4 123 aaKnown RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 ARL11Q969Q4 196 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 COL12A1Q99715 3063 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
LMO1-201ENST00000335790 RNF115Q9Y4L5 304 aa11.22□□□□□ -0.61
LMO1-201ENST00000335790 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 E5RGE8 158 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 TAAR5O14804 337 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 SIAH2O43255 324 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 FSTL3O95633 263 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 CYB5R3P00387 301 aaPredicted RBP11.21□□□□□ -0.61
LMO1-201ENST00000335790 HKR1P10072 659 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 SSTR5P35346 364 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
LMO1-201ENST00000335790 CCL8P80075 99 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 CDSNQ15517 529 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 FAM201AQ5SY85 155 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 MEX3BQ6ZN04 569 aaKnown RBP11.21□□□□□ -0.61
LMO1-201ENST00000335790 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 ZNF808Q8N4W9 903 aaPredicted RBP11.21□□□□□ -0.61
LMO1-201ENST00000335790 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 EDARADDQ8WWZ3 215 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 NINJ1Q92982 152 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 AGMATQ9BSE5 352 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 PLEKHF2Q9H8W4 249 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 SAP30LQ9HAJ7 183 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 MED9Q9NWA0 146 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 GAB2Q9UQC2 676 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 NSG2Q9Y328 171 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 POMT1Q9Y6A1 747 aa11.21□□□□□ -0.61
LMO1-201ENST00000335790 TRAV38-1A0A0B4J264 116 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 DEFB108AA8MXU0 73 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 PITX3O75364 302 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 MMP9P14780 707 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 AGAP20933 346 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
LMO1-201ENST00000335790 LOXL3P58215 753 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 ID3Q02535 119 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 GNMTQ14749 295 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 ZNF66Q6ZN08 573 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 OR52M1Q8NGK5 317 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 UBALD1Q8TB05 177 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 CA5BP1Q8WTZ4 195 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 DCTN5Q9BTE1 182 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 OR2S2Q9NQN1 319 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 PTPN13Q12923 2485 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 ICE1Q9Y2F5 2266 aa11.2□□□□□ -0.62
LMO1-201ENST00000335790 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
LMO1-201ENST00000335790 A0A1B0GU03 582 aa11.19□□□□□ -0.62
LMO1-201ENST00000335790 TNFSF12O43508 249 aa11.19□□□□□ -0.62
LMO1-201ENST00000335790 IGKV1-39P01597 117 aa11.19□□□□□ -0.62
LMO1-201ENST00000335790 IGKV1D-39P04432 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms