RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TREM2Q9NZC2 230 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 AKAP13Q12802 2813 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 IGKV1-5P01602 117 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 PIP4P1Q86T03 277 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 OR1K1Q8NGR3 316 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 BCL2L14Q9BZR8 327 aa13.01□□□□□ -0.33
BRCC3-201ENST00000330045 ZFP92A6NM28 416 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 SIRPB1O00241 398 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 IL18BPO95998 194 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
BRCC3-201ENST00000330045 CD200P41217 278 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 RAB11AP62491 216 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
BRCC3-201ENST00000330045 DCAF10Q5QP82 559 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF787Q6DD87 383 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF525Q8N782 197 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 VSIRQ9H7M9 311 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 CISD1Q9NZ45 108 aaKnown RBP13□□□□□ -0.33
BRCC3-201ENST00000330045 RNF150Q9ULK6 438 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 GVINP1Q7Z2Y8 2422 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 TGIF2-C20orf24A0A0A6YYL0 155 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 A0A1W2PR80 420 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 B4DEV8 164 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 YIF1AO95070 293 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 OR2H2O95918 312 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 S100PP25815 95 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 HBG1P69891 147 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 HBG2P69892 147 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ESPL1Q14674 2120 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF585BQ52M93 769 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 LCN15Q6UWW0 184 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 MDP1Q86V88 176 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
BRCC3-201ENST00000330045 RTL8AQ9BWD3 113 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 GPR87Q9BY21 358 aa13□□□□□ -0.33
BRCC3-201ENST00000330045 LIN7CQ9NUP9 197 aaKnown RBP13□□□□□ -0.33
BRCC3-201ENST00000330045 URB1O60287 2271 aaKnown RBP12.99□□□□□ -0.33
BRCC3-201ENST00000330045 DNAJC13O75165 2243 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 BCL2P10415 239 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 NDUFA6P56556 154 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 FAM90A2PQ658T7 463 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 NANOS1Q8WY41 292 aaKnown RBP12.99□□□□□ -0.33
BRCC3-201ENST00000330045 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-201ENST00000330045 TOLLIPQ9H0E2 274 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 ZNF665Q9H7R5 613 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 GP6Q9HCN6 339 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 CEP250Q9BV73 2442 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 SPTBN2O15020 2390 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 WDR1O75083 606 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 CDX1P47902 265 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-201ENST00000330045 LRRC75BQ2VPJ9 315 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 DOK5Q9P104 306 aa12.99□□□□□ -0.33
BRCC3-201ENST00000330045 CYB5BO43169 146 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 MEOX1P50221 254 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 SERF2P84101 59 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 FBXW9Q5XUX1 488 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 WDR86Q86TI4 376 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 Q8IYB0 196 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 SCCPDHQ8NBX0 429 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 CEACAM6P40199 344 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 FGF8P55075 233 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-201ENST00000330045 SPANXN5Q5MJ07 72 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 OR14J1Q9UGF5 321 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 POLDIP2Q9Y2S7 368 aa12.98□□□□□ -0.33
BRCC3-201ENST00000330045 C21orf140B9A014 251 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 SP1P08047 785 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 SLC10A1Q14973 349 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 TBC1D28Q2M2D7 210 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 VASH2Q86V25 355 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 DRAM1Q8N682 238 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 KLF13Q9Y2Y9 288 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 WDR61Q9GZS3 305 aaKnown RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
BRCC3-201ENST00000330045 WIPI2Q9Y4P8 454 aa12.97□□□□□ -0.33
BRCC3-201ENST00000330045 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 PRR33A8MZF0 331 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 KLRC4-KLRK1H3BQV0 150 aa12.96□□□□□ -0.33
BRCC3-201ENST00000330045 NXPH2O95156 264 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms