RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MAPK3P27361 379 aaPredicted RBP9.63□□□□□ -0.87
TPM3-204ENST00000323144 BLVRBP30043 206 aaPredicted RBP9.63□□□□□ -0.87
TPM3-204ENST00000323144 ACTBP60709 375 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 GNB1P62873 340 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 DGCR2P98153 550 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 FAM131AQ6UXB0 335 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 ZNF833PQ6ZTB9 187 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 C6orf201Q7Z4U5 140 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 CDH26Q8IXH8 852 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 NANOGP1Q8N7R0 232 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 OR8H1Q8NGG4 311 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 OR5M8Q8NGP6 311 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 OR5B12Q96R08 314 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 UQCC2Q9BRT2 126 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 HDHD3Q9BSH5 251 aaPredicted RBP9.63□□□□□ -0.87
TPM3-204ENST00000323144 TMEM59Q9BXS4 323 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 CST11Q9H112 138 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 KLK15Q9H2R5 256 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 RAB9BQ9NP90 201 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 C8orf4Q9NR00 106 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 LSM2Q9Y333 95 aaKnown RBP9.63□□□□□ -0.87
TPM3-204ENST00000323144 WSB1Q9Y6I7 421 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 SEC14L6B5MCN3 397 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 CASQ2O14958 399 aaPredicted RBP9.62□□□□□ -0.87
TPM3-204ENST00000323144 CA11O75493 328 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 HLA-DRB1P01911 266 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 IGF1P05019 195 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 CD1AP06126 327 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 CDX1P47902 265 aaPredicted RBP9.62□□□□□ -0.87
TPM3-204ENST00000323144 RPS27AP62979 156 aaKnown RBP9.62□□□□□ -0.87
TPM3-204ENST00000323144 RPL39P5Q59GN2 51 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 CASTOR1Q8WTX7 329 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 GFI1Q99684 422 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 PLCXD1Q9NUJ7 323 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
TPM3-204ENST00000323144 ANKRD65E5RJM6 399 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 NBR2O15453 112 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 CDK1P06493 297 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 HTR2CP28335 458 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
TPM3-204ENST00000323144 KIR2DS1Q14954 304 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 ECSCRQ19T08 205 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 ACSM3Q53FZ2 586 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 GLDNQ6ZMI3 551 aaPredicted RBP9.61□□□□□ -0.87
TPM3-204ENST00000323144 OR2AK2Q8NG84 335 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 SETD6Q8TBK2 473 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 IL1F10Q8WWZ1 152 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 ZNF251Q9BRH9 671 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 FAAP24Q9BTP7 215 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 MND1Q9BWT6 205 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 GON7Q9BXV9 100 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 ANKRD60Q9BZ19 345 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 ALX4Q9H161 411 aaPredicted RBP9.61□□□□□ -0.87
TPM3-204ENST00000323144 OR51J1Q9H342 316 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 OR1A1Q9P1Q5 309 aa9.61□□□□□ -0.87
TPM3-204ENST00000323144 SOX15O60248 233 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 YPEL1O60688 119 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 NDUFA3O95167 84 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 NAPSAO96009 420 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 GLAP06280 429 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 ECI1P42126 302 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 HLA-DRB3P79483 266 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 QRFPP83859 136 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 HTD2P86397 168 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 KIAA0141Q14154 515 aaPredicted RBP9.6□□□□□ -0.87
TPM3-204ENST00000323144 P2RY14Q15391 338 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 C5orf64Q2M2E5 130 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 C1orf100Q5SVJ3 147 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 C9orf66Q5T8R8 295 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 UNQ9370/PRO34162Q6UXP9 181 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 ZNF554Q86TJ5 538 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 THRSPQ92748 146 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 NEDD4LQ96PU5 975 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 YPEL2Q96QA6 119 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 TM2D1Q9BX74 207 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 CHMP1AQ9HD42 196 aaPredicted RBP9.6□□□□□ -0.87
TPM3-204ENST00000323144 ISYNA1Q9NPH2 558 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 ERGIC3Q9Y282 383 aa9.6□□□□□ -0.87
TPM3-204ENST00000323144 TRAV41A0A0B4J266 112 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 TMEM14DPA8MWL7 114 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 I3L521 148 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 SLC22A1O15245 554 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 IGLV1-40P01703 118 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 UBBP0CG47 229 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 OR5H8P0DN80 308 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 AQP4P55087 323 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 RPS25P62851 125 aaKnown RBP9.59□□□□□ -0.87
TPM3-204ENST00000323144 MED22Q15528 200 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 ZNF260Q3ZCT1 412 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 HSD17B12Q53GQ0 312 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 LIPKQ5VXJ0 399 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 ZNF880Q6PDB4 577 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 ZNF491Q8N8L2 437 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 PHYHIPQ92561 330 aa9.59□□□□□ -0.87
TPM3-204ENST00000323144 GALMQ96C23 342 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms