RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MGMTP16455 207 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 CPEP16870 476 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 SRMP19623 302 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 CD1BP29016 333 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 LUMP51884 338 aaPredicted RBP11.14□□□□□ -0.63
RPP40-201ENST00000319533 LTC4SQ16873 150 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 MOB3BQ86TA1 216 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 OR5M8Q8NGP6 311 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 OR2T10Q8NGZ9 312 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 BANF2Q9H503 90 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 SACSQ9NZJ4 4579 aa11.14□□□□□ -0.63
RPP40-201ENST00000319533 TRAV39A0A0B4J263 110 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 A0A1W2PPE3 182 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 FAM90A10PA6NDY2 464 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 FAM90A23PA8MXZ1 464 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 MCRIP1C9JLW8 97 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 SC5DO75845 299 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 IGHG4P01861 327 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 RPS25P62851 125 aaKnown RBP11.13□□□□□ -0.63
RPP40-201ENST00000319533 FHL3Q13643 280 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 Q3ZCU0 254 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 CXorf66Q5JRM2 361 aaPredicted RBP11.13□□□□□ -0.63
RPP40-201ENST00000319533 GPR107Q5VW38 600 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 RAB12Q6IQ22 244 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 LRRTM1Q86UE6 522 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 LYPD6Q86Y78 171 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 CLVS1Q8IUQ0 354 aaPredicted RBP11.13□□□□□ -0.63
RPP40-201ENST00000319533 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 RTN4IP1Q8WWV3 396 aaPredicted RBP11.13□□□□□ -0.63
RPP40-201ENST00000319533 S1PR3Q99500 378 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 FUNDC2Q9BWH2 189 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 BATF3Q9NR55 127 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
RPP40-201ENST00000319533 RCC2Q9P258 522 aaKnown RBP11.13□□□□□ -0.63
RPP40-201ENST00000319533 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
RPP40-201ENST00000319533 C3orf84H3BNL1 204 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 AIPO00170 330 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 ORC5O43913 435 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 IGF1P05019 195 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 CD36P16671 472 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 GADD45AP24522 165 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 HTR2CP28335 458 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 REG1BP48304 166 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 ZNF137PP52743 207 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 FAM46BQ96A09 425 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 Q96M66 194 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 NDUFB11Q9NX14 153 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 ETAA1Q9NY74 926 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 PEX16Q9Y5Y5 336 aa11.12□□□□□ -0.63
RPP40-201ENST00000319533 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 CA11O75493 328 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 MOSP00540 346 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 GLAP06280 429 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 FUT3P21217 361 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 PSMB8P28062 276 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 TGFBR1P36897 503 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 RANBP1P43487 201 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 RAB25P57735 213 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 ARL11Q969Q4 196 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 ISOC1Q96CN7 298 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 PRR25Q96S07 402 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 OR51E2Q9H255 320 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 PLGRKTQ9HBL7 147 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 TRAPPC2LQ9UL33 140 aa11.11□□□□□ -0.63
RPP40-201ENST00000319533 ZNF736B4DX44 427 aaPredicted RBP11.1□□□□□ -0.63
RPP40-201ENST00000319533 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
RPP40-201ENST00000319533 SLC22A1O15245 554 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 TXNL1O43396 289 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 PDCD6O75340 191 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 GABARAPO95166 117 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 BPNT1O95861 308 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 MT-ND4P03905 459 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 IL3RAP26951 378 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
RPP40-201ENST00000319533 CHATP28329 748 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 FABP5Q01469 135 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 C4orf48Q5BLP8 95 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 C6orf183Q5T699 404 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 FAM53AQ6NSI3 398 aaPredicted RBP11.1□□□□□ -0.63
RPP40-201ENST00000319533 TRAT1Q6PIZ9 186 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 TMEM91Q6ZNR0 172 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
RPP40-201ENST00000319533 ANKRD13BQ86YJ7 626 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 KCNG3Q8TAE7 436 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 NEDD4LQ96PU5 975 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms