RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 KLK10O43240 276 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
CLCN6-201ENST00000312413 NXPH1P58417 271 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 NHLRC3Q5JS37 347 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR8B3Q8NGG8 313 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR10S1Q8NGN2 331 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR8B2Q96RD0 313 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 ZNF324O75467 553 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-201ENST00000312413 LHX8Q68G74 356 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 TRBV5-5A0A0J9YX44 114 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 RFLNBQ8N5W9 214 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 OR2I1PQ8NGU4 316 aa11.9□□□□□ -0.5
CLCN6-201ENST00000312413 TNFSF14O43557 240 aa11.9□□□□□ -0.51
CLCN6-201ENST00000312413 FOLR2P14207 255 aa11.9□□□□□ -0.51
CLCN6-201ENST00000312413 SRSF5Q13243 272 aaKnown RBP11.9□□□□□ -0.51
CLCN6-201ENST00000312413 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.51
CLCN6-201ENST00000312413 SLC25A40Q8TBP6 338 aa11.9□□□□□ -0.51
CLCN6-201ENST00000312413 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLCN6-201ENST00000312413 HEXA-AS1Q9H8Q6 139 aa11.9□□□□□ -0.51
CLCN6-201ENST00000312413 DDX60LQ5H9U9 1706 aaKnown RBP11.9□□□□□ -0.51
CLCN6-201ENST00000312413 MAS1LP35410 378 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A27PA6NNH2 459 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 H7C2G1 150 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 AGAP20933 346 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 EPHA8P29322 1005 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-201ENST00000312413 CKS2P33552 79 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 RP1P56715 2156 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 A0A0U1RQV5 110 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 CD3EP07766 207 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 APELAP0DMC3 54 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 COL9A1P20849 921 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 RND3P61587 244 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 REC114Q7Z4M0 266 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 ARL6IP6Q8N6S5 226 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 LHX9Q9NQ69 397 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 MBD1Q9UIS9 605 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-201ENST00000312413 WIPI2Q9Y4P8 454 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 PCM1Q15154 2024 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 CD200R1LQ6Q8B3 271 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
CLCN6-201ENST00000312413 A0A1B0GV90 55 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 AMMECR1LQ6DCA0 310 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 LSM10Q969L4 123 aaKnown RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 PRSS27Q9BQR3 290 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 SCNM1Q9BWG6 230 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 KCNE5Q9UJ90 142 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 SELENOTP62341 195 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 AMY1AP04745 511 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 TTC32Q5I0X7 151 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 MTURNQ8N3F0 131 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 APCDD1LQ8NCL9 501 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 FBLIM1Q8WUP2 373 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 SLC25A38Q96DW6 304 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 GGACTQ9BVM4 153 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 CENPVL1A0A0U1RR11 272 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 HLA-DRB1P01911 266 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 MRPL13Q9BYD1 178 aaKnown RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 IGHV3-21A0A0B4J1V1 117 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 IGHV1OR15-9A0A0B4J2B8 117 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 OR2A4O95047 310 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 SOX8P57073 446 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 MMDQ15546 238 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 HIKESHIQ53FT3 197 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 OR2A7Q96R45 310 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 RARRES2Q99969 163 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 METTL1Q9UBP6 276 aaKnown RBP11.88□□□□□ -0.51
CLCN6-201ENST00000312413 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
CLCN6-201ENST00000312413 DSPPQ9NZW4 1301 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 ASAH2BP0C7U1 165 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 LINC00869P0C866 280 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 MAGEA5P43359 124 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 H2BFSP57053 126 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 RND1Q92730 232 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 GUCD1Q96NT3 240 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms