RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF441Q8N8Z8 693 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 FAM131CQ96AQ9 280 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 ABHD17AQ96GS6 310 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 SLC25A33Q9BSK2 321 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 RAB1BQ9H0U4 201 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 GSN-AS1Q9NRJ2 163 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 ZSWIM8A7E2V4 1837 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 A0A0B4J293 547 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 A6NJY4 79 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 IGHV3-13P01766 116 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 IGHV3-7P01780 117 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 RTP5Q14D33 572 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 HFEQ30201 348 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 TMEM91Q6ZNR0 172 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 MRGPRDQ8TDS7 321 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 ADTRPQ96IZ2 230 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 GHITMQ9H3K2 345 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 OR5AC2Q9NZP5 309 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 TMEM50BP56557 158 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 RELBQ01201 579 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 WDR25Q64LD2 544 aaPredicted RBP7.14□□□□□ -1.27
VPS41-202ENST00000310301 SPINK14Q6IE38 97 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 ZNF793Q6ZN11 406 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 OR8B12Q8NGG6 310 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 OR1K1Q8NGR3 316 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 CCL28Q9NRJ3 127 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 TUBD1Q9UJT1 453 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 DHRS7CA6NNS2 312 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 NDUFB3O43676 98 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 NKX2-2O95096 273 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 MGPP08493 103 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 LRRC10Q5BKY1 277 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 SLC25A34Q6PIV7 304 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 AMER3Q8N944 861 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 NPEPL1Q8NDH3 523 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 RNF133Q8WVZ7 376 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 WDR34Q96EX3 536 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 WFIKKN1Q96NZ8 548 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 OTX1P32242 354 aaPredicted RBP7.14□□□□□ -1.27
VPS41-202ENST00000310301 MFAP2P55001 183 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 ADIPOQQ15848 244 aa7.14□□□□□ -1.27
VPS41-202ENST00000310301 MPTX1A8MV57 137 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 APC2O95996 2303 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 PPYP01298 95 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 CTLA4P16410 223 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 EFNB2P52799 333 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 OR8B3Q8NGG8 313 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 OR4C3Q8NH37 302 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 PPP1R3EQ9H7J1 279 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 TRGC1P0CF51 173 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 CTAG1AP78358 180 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 RUNX1Q01196 453 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 OR10S1Q8NGN2 331 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 RASL10BQ96S79 203 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
VPS41-202ENST00000310301 SOX21Q9Y651 276 aaPredicted RBP7.13□□□□□ -1.27
VPS41-202ENST00000310301 TRAV8-7A0A075B6U6 113 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 PLPP3O14495 311 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 FFAR1O14842 300 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 NTN1O95631 604 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 CDS2O95674 445 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 EML2O95834 649 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 FZD5Q13467 585 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 C10orf113Q5VZT2 155 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 TMEM136Q6ZRR5 245 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 HIST1H2BAQ96A08 127 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 MRGPRFQ96AM1 343 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 OR2V2Q96R30 315 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 METTL1Q9UBP6 276 aaKnown RBP7.13□□□□□ -1.27
VPS41-202ENST00000310301 FZR1Q9UM11 496 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 TMSB15BA0A087X1C1 80 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 HIST1H1BP16401 226 aaKnown RBP7.13□□□□□ -1.27
VPS41-202ENST00000310301 WNT5AP41221 380 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 PRSS12P56730 875 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 VN1R4Q7Z5H5 301 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 EID2BQ96D98 161 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 SLC52A3Q9NQ40 469 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 ONECUT1Q9UBC0 465 aa7.13□□□□□ -1.27
VPS41-202ENST00000310301 C16orf97H3BN30 126 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 HBZP02008 142 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 HSPB1P04792 205 aaKnown RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 ZNF32P17041 273 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 C8orf82Q6P1X6 216 aaPredicted RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 PERPQ96FX8 193 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 GNRHR2Q96P88 292 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 TMEM38BQ9NVV0 291 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 CDC42EP3Q9UKI2 254 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR2W1Q9Y3N9 320 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 H0YL77 283 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 J3KRW8 73 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 NTN3O00634 580 aaPredicted RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR8I2Q8N0Y5 310 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 ATOH7Q8N100 152 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR4D11Q8NGI4 311 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR4S2Q8NH73 311 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms