RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FOXG1P55316 489 aaPredicted RBP8.83□□□□□ -1
APOBEC3F-201ENST00000308521 RND3P61587 244 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 SELENOTP62341 195 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 CCL20P78556 96 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 COL5A1-AS1Q5SY13 56 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 SSX7Q7RTT5 188 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 C20orf196Q8IYI0 205 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 CORO2AQ92828 525 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 NABP1Q96AH0 204 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM18Q96B42 140 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 SCNM1Q9BWG6 230 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 SF3B5Q9BWJ5 86 aaKnown RBP8.83□□□□□ -1
APOBEC3F-201ENST00000308521 MSL2Q9HCI7 577 aa8.83□□□□□ -1
APOBEC3F-201ENST00000308521 FAM230AA0A1W2PPH8 454 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 K7EM74 188 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 SOX15O60248 233 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 BRS3P32247 399 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 OPRM1P35372 400 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 MTCP1P56278 107 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 ERVFRD-1P60508 538 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PRDX4Q13162 271 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 OR8B8Q15620 311 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 CEACAM16Q2WEN9 425 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PHLDA2Q53GA4 152 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 TSPO2Q5TGU0 170 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 CLEC2AQ6UVW9 174 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 FAM185AQ8N0U4 392 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM178AQ8NBL3 297 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 OR5L1Q8NGL2 311 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PLEKHF2Q9H8W4 249 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF286AQ9HBT8 521 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 RELNP78509 3460 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PRR14LQ5THK1 2151 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF891A8MT65 544 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-201ENST00000308521 M0R135 149 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 GFRA3O60609 400 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 FXYD4P59646 89 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-201ENST00000308521 TAF9Q16594 264 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 NCR3LG1Q68D85 454 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF429Q86V71 674 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 OR10G4Q8NGN3 311 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 FGFBP3Q8TAT2 258 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 SPTSSAQ969W0 71 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 GNPNAT1Q96EK6 184 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF799Q96GE5 643 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
APOBEC3F-201ENST00000308521 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 CBLN4Q9NTU7 201 aa8.82□□□□□ -1
APOBEC3F-201ENST00000308521 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 A0A096LPE4 126 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 TRGV5A0A0B4J1U4 118 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 A0A1W2PPZ6 126 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 IGSF23A1L1A6 192 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 FAM24AA6NFZ4 105 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF727A8MUV8 499 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 PHF1O43189 567 aaPredicted RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 MRPL33O75394 65 aaKnown RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 MMP9P14780 707 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 ICAM4Q14773 271 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 CNN3Q15417 329 aaKnown RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 RBMXL1Q96E39 390 aaKnown RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 REEP6Q96HR9 211 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SPIN2AQ99865 258 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SPIN2BQ9BPZ2 258 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 C20orf144Q9BQM9 153 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 C12orf49Q9H741 205 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 PLEK2Q9NYT0 353 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 MED12LQ86YW9 2145 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 TGIF2-C20orf24A0A0A6YYL0 155 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 MED19A0JLT2 244 aaPredicted RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 NKX6-3A6NJ46 265 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 DNPH1O43598 174 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SYNGR4O95473 234 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 HBE1P02100 147 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 OPN1MWP04001 364 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 OPN1MW2P0DN77 364 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 OPN1MW3P0DN78 364 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 HOXC12P31275 282 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 GTF3C1Q12789 2109 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 LHFPL2Q6ZUX7 228 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 EXTL1Q92935 676 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM56Q96MV1 263 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 ABHD14AQ9BUJ0 271 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SLC7A10Q9NS82 523 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 LYRM2Q9NU23 88 aaPredicted RBP8.81□□□□□ -1
APOBEC3F-201ENST00000308521 IL36GQ9NZH8 169 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM56-RWDD3S4R434 201 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 PTPRQQ9UMZ3 2332 aa8.81□□□□□ -1
APOBEC3F-201ENST00000308521 SPTA1P02549 2419 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 C3orf85A0A1B0GTC6 90 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 A0A1B0GV50 99 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 C20orf202A1L168 122 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 MPPED1O15442 326 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms