RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPIAL4AQ9Y536 164 aa9.79□□□□□ -0.84
PCDHGC3-201ENST00000308177 PHF3Q92576 2039 aaKnown RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 PGLYRP1O75594 196 aaPredicted RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 GAPDHP04406 335 aaKnown RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 FGF8P55075 233 aaPredicted RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 CCL13Q99616 98 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 CLEC12BQ2HXU8 276 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF561Q8N587 486 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 ABHD14BQ96IU4 210 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 PARP11Q9NR21 331 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 MPDZO75970 2070 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 A0A1W2PPE3 182 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 CDK2AP1O14519 115 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF737O75373 536 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 UCP3P55916 312 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF90Q03938 601 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 MARS2Q96GW9 593 aaKnown RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 HLA-GP17693 338 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 CXorf66Q5JRM2 361 aaPredicted RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 LYZL4Q96KX0 146 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 SNX22Q96L94 193 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 GNB4Q9HAV0 340 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 SLC25A10Q9UBX3 287 aaPredicted RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 FOXD3Q9UJU5 478 aaPredicted RBP9.78□□□□□ -0.84
PCDHGC3-201ENST00000308177 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 A0A1W2PPQ1 181 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 E9PQ18 207 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 CDX4O14627 284 aaPredicted RBP9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 BTNL8Q6UX41 500 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 PRR7Q8TB68 274 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 DIRC2Q96SL1 478 aa9.77□□□□□ -0.84
PCDHGC3-201ENST00000308177 NCBP2LA6PVI3 153 aaKnown RBP9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 CD8AP01732 235 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 ESPL1Q14674 2120 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 GGNQ86UU5 652 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 BAGE2Q86Y30 109 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 TGIF2LYQ8IUE0 185 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 TGIF2LXQ8IUE1 241 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 AQP10Q96PS8 301 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 ODAMA1E959 279 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 TGOLN2O43493 480 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 SMPD2O60906 423 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 NPBWR1P48145 328 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 H3F3AP84243 136 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 PAQR4Q8N4S7 273 aaPredicted RBP9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 NUP210Q8TEM1 1887 aaPredicted RBP9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 A0A1W2PN81 502 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 SOX15O60248 233 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 GYPAP02724 150 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 CECR9P0C854 216 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 CHRNA7P36544 502 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 RHOBP62745 196 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 KDF1Q8NAX2 398 aaPredicted RBP9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 TMEM230Q96A57 120 aa9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 AMMECR1Q9Y4X0 333 aaPredicted RBP9.77□□□□□ -0.85
PCDHGC3-201ENST00000308177 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 Q0VFX4 171 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 MISP3Q96FF7 219 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR1A1Q9P1Q5 309 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 DOCK7Q96N67 2140 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 COL6A6A6NMZ7 2263 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 RAB29O14966 203 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 PITX3O75364 302 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 MMP9P14780 707 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 CSRP1P21291 193 aaKnown RBP9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 CEACAM3P40198 252 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ERVS71-1P61550 626 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 TMEM187Q14656 261 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 C2orf68Q2NKX9 166 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 TUSC1Q2TAM9 212 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 SEC11CQ9BY50 192 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 CLN8Q9UBY8 286 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZDHHC8Q9ULC8 765 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 RHBDL1O75783 438 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR4A8P0C604 315 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 HKR1P10072 659 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 IGHV1-2P23083 117 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 CSN1S1P47710 185 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 SSX2Q16385 188 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 TIMM23BQ5SRD1 257 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF66Q6ZN08 573 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF818PQ6ZRF7 136 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR8B3Q8NGG8 313 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR8B2Q96RD0 313 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 SH2D2AQ9NP31 389 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 MMP24Q9Y5R2 645 aa9.76□□□□□ -0.85
PCDHGC3-201ENST00000308177 HPRT1P00492 218 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 SULT1A2P50226 295 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 TMEM241Q24JQ0 296 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 367.3 ms