RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 IAPPP10997 89 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 SPNS3Q6ZMD2 512 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 SCCPDHQ8NBX0 429 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 RHOVQ96L33 236 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 RIMS4Q9H426 269 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-204ENST00000300862 TRAPPC2LQ9UL33 140 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 KCNS2Q9ULS6 477 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 TTC28Q96AY4 2481 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 USF3Q68DE3 2245 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 A0A1B0GWJ7 208 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CLEC18AA5D8T8 446 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 RBFOX3A6NFN3 312 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 J3QT63 122 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 GRPP07492 148 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 ARG2P78540 354 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 DEFA6Q01524 100 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 TESK1Q15569 626 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CLEC18CQ8NCF0 446 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 OR10V1Q8NGI7 309 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 RAB39BQ96DA2 213 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 OPA3Q9H6K4 179 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 GAR1Q9NY12 217 aaKnown RBP10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CACNG5Q9UF02 275 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CNOT1A5YKK6 2376 aaKnown RBP10.92□□□□□ -0.66
HIF3A-204ENST00000300862 A6NJY4 79 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 H0YL77 283 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 H3BQ15 152 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 WDR1O75083 606 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 TFF1P04155 84 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CD46P15529 392 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 S100A2P29034 98 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 ELOBQ15370 118 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-204ENST00000300862 STX12Q86Y82 276 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 THNSL2Q86YJ6 484 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 GP6Q9HCN6 339 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
HIF3A-204ENST00000300862 ERVFRD-1P60508 538 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 C21orf62-AS1Q17RA5 79 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 DUXBA0A1W2PPF3 345 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BKO60814 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BJP06899 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BOP23527 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 S100GP29377 79 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BBP33778 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 PLA2G5P39877 138 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 PPP1CBP62140 327 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 SRSF6Q13247 344 aaKnown RBP10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HNF4GQ14541 408 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 TBC1D28Q2M2D7 210 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF766Q5HY98 468 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-204ENST00000300862 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 SLC25A24Q6NUK1 477 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 LINC00596Q86U02 117 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF610Q8N9Z0 462 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 GTF3AQ92664 365 aaKnown RBP10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 FER1L6-AS2Q96M78 137 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
HIF3A-204ENST00000300862 TRBV6-6A0A0A6YYG2 114 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 KIAA1324LA8MWY0 1029 aaPredicted RBP10.9□□□□□ -0.66
HIF3A-204ENST00000300862 SMPD2O60906 423 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 NXPH2O95156 264 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 METTL15P1P0C7V9 234 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 ATP5SQ99766 215 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 CABLES2Q9BTV7 478 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 PKIBQ9C010 78 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 RNF150Q9ULK6 438 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 DOCK11Q5JSL3 2073 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 MAP1BP46821 2468 aaKnown RBP10.9□□□□□ -0.66
HIF3A-204ENST00000300862 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 SOD3P08294 240 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
HIF3A-204ENST00000300862 ARL16Q0P5N6 197 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 FAM180AQ6UWF9 173 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF826PQ6ZT77 177 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 SLC25A40Q8TBP6 338 aa10.9□□□□□ -0.66
HIF3A-204ENST00000300862 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
HIF3A-204ENST00000300862 LAMA5O15230 3695 aa10.9□□□□□ -0.67
HIF3A-204ENST00000300862 M0R296 226 aa10.89□□□□□ -0.67
HIF3A-204ENST00000300862 WNT9BO14905 357 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms