RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TEX36Q5VZQ5 186 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 LIN54Q6MZP7 749 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 H1FOOQ8IZA3 346 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-201ENST00000270061 ASCC1Q8N9N2 400 aaKnown RBP20.35■□□□□ 0.85
SSBP4-201ENST00000270061 COQ8AQ8NI60 647 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 KCNIP1Q9NZI2 227 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 KIF25Q9UIL4 384 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 COL6A5A8TX70 2615 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 IGHV3OR15-7A0A075B7D8 119 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 OOEPA6NGQ2 149 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 LRRC30A6NM36 301 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 IFNA2P01563 188 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 TFF1P04155 84 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 ABCA11PQ4W5N1 156 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 KRBOX4Q5JUW0 171 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 DCAF12L2Q5VW00 463 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 SDSLQ96GA7 329 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 KIRREL1Q96J84 757 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 TAF9BQ9HBM6 251 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 FAM157AC9JC47 383 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 CYB5R3P00387 301 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-201ENST00000270061 CD80P33681 288 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 GABRA2P47869 451 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 CR1LQ2VPA4 569 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 STUMQ69YW2 141 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 FAM185AQ8N0U4 392 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 ZNF561Q8N587 486 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 OR11H4Q8NGC9 324 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 GALNT14Q96FL9 552 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 ZNF665Q9H7R5 613 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 OR2W1Q9Y3N9 320 aa20.34■□□□□ 0.85
SSBP4-201ENST00000270061 TRAV39A0A0B4J263 110 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 K7N7A8 449 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 MGST3O14880 152 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 DVL1P1P54792 670 aaPredicted RBP20.33■□□□□ 0.84
SSBP4-201ENST00000270061 SLC9A3R2Q15599 337 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 C6orf183Q5T699 404 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 IL17RELQ6ZVW7 336 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 CCDC71LQ8N9Z2 235 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 RAB39BQ96DA2 213 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 NCOR1P1Q9H4R4 102 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 LPAR2Q9HBW0 351 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 SLC2A9Q9NRM0 540 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 KCNIP3Q9Y2W7 256 aa20.33■□□□□ 0.84
SSBP4-201ENST00000270061 GNRHRP30968 328 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 RND3P61587 244 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 TRAT1Q6PIZ9 186 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 KCTD9Q7L273 389 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 RTN4IP1Q8WWV3 396 aaPredicted RBP20.32■□□□□ 0.84
SSBP4-201ENST00000270061 NAA60Q9H7X0 242 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 RAB18Q9NP72 206 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 TMEM106BQ9NUM4 274 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 MAB21L2Q9Y586 359 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 ARHGAP32A7KAX9 2087 aa20.32■□□□□ 0.84
SSBP4-201ENST00000270061 TEX13DA0A0J9YY54 714 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-201ENST00000270061 MSMBP08118 114 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 SRD5A1P18405 259 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 GLIPR1P48060 266 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 ANKRD55Q3KP44 614 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 FAM201AQ5SY85 155 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 C1orf87Q8N0U7 546 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 OR5D13Q8NGL4 314 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 WDR89Q96FK6 387 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-201ENST00000270061 TOLLIPQ9H0E2 274 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 FBN1P35555 2871 aaKnown RBP20.31■□□□□ 0.84
SSBP4-201ENST00000270061 Q5BKY6 102 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 ZNF565Q8N9K5 539 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 DCAF16Q9NXF7 216 aa20.31■□□□□ 0.84
SSBP4-201ENST00000270061 DOCK11Q5JSL3 2073 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 IGKV1D-13A0A0B4J2D9 117 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 C12orf77C9JDV5 145 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 IGKV1-13P0DP09 117 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 LAMTOR1Q6IAA8 161 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 LDLRAD3Q86YD5 345 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 IL1F10Q8WWZ1 152 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 TMEM186Q96B77 213 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 FAM234AQ9H0X4 552 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 HIF1ANQ9NWT6 349 aa20.3■□□□□ 0.84
SSBP4-201ENST00000270061 GPR31O00270 319 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 SNAPC5O75971 98 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 IGHV2-5P01817 119 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 PHLDA2Q53GA4 152 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 ZNF788Q6ZQV5 615 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 C9orf62Q8N4C0 152 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 ZBTB8BQ8NAP8 495 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-201ENST00000270061 SECTM1Q8WVN6 248 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 GALMQ96C23 342 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 SUCNR1Q9BXA5 334 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 SLC5A7Q9GZV3 580 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 OR1A1Q9P1Q5 309 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 TMEM178BH3BS89 294 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 ZNRF1Q8ND25 227 aa20.29■□□□□ 0.84
SSBP4-201ENST00000270061 TRAV38-1A0A0B4J264 116 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 LGALS8O00214 317 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 TMEM187Q14656 261 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 PRR18Q8N4B5 295 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 GAFA1Q96PS6 74 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 DNTTIP1Q9H147 329 aa20.28■□□□□ 0.84
SSBP4-201ENST00000270061 ODAMA1E959 279 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 CCSO14618 274 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms