RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF705AQ6ZN79 300 aaPredicted RBP10.22□□□□□ -0.77
USHBP1-201ENST00000252597 KMT5CQ86Y97 462 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 OR10A7Q8NGE5 316 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 OR51G1Q8NGK1 321 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 OR2V1Q8NHB1 315 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 ARV1Q9H2C2 271 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 PISDQ9UG56 409 aa10.22□□□□□ -0.77
USHBP1-201ENST00000252597 TMEM131Q92545 1883 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 AKAP6Q13023 2319 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 GATCO43716 136 aaKnown RBP10.21□□□□□ -0.77
USHBP1-201ENST00000252597 NXPH2O95156 264 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 HBG1P69891 147 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 HBG2P69892 147 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 SLC38A11Q08AI6 406 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 FAM185AQ8N0U4 392 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 IL22RA2Q969J5 263 aa10.21□□□□□ -0.77
USHBP1-201ENST00000252597 ACACAQ13085 2346 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF320A2RRD8 509 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 C10orf142B7Z368 130 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 DVL1O14640 695 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 MDH2P40926 338 aaKnown RBP10.21□□□□□ -0.78
USHBP1-201ENST00000252597 RPL29P47914 159 aaKnown RBP10.21□□□□□ -0.78
USHBP1-201ENST00000252597 EDDM3BP56851 147 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 IL24Q13007 206 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 EDDM3AQ14507 147 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 BSXQ3C1V8 233 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF506Q5JVG8 444 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 FAM78BQ5VT40 261 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 LURAP1LQ8IV03 231 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 FADS6Q8N9I5 356 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 PRDM13Q9H4Q3 707 aa10.21□□□□□ -0.78
USHBP1-201ENST00000252597 CDIPTO14735 213 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 SERPINA7P05543 415 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 UMODP07911 640 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 FGF7P21781 194 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 PSMB3P49720 205 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 SLC25A53Q5H9E4 307 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 AGBL5Q8NDL9 886 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 CADM4Q8NFZ8 388 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 SNIP1Q8TAD8 396 aaKnown RBP10.2□□□□□ -0.78
USHBP1-201ENST00000252597 SIGLEC12Q96PQ1 595 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 CBLN4Q9NTU7 201 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 CEP295Q9C0D2 2601 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 CST2P09228 141 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 CTSSP25774 331 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 OTX1P32242 354 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-201ENST00000252597 OR8G1Q15617 311 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 ZDHHC16Q969W1 377 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 IGHV1-45A0A0A0MS14 117 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 C1QTNF9BB2RNN3 333 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 PAX9P55771 341 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 C21orf62-AS1Q17RA5 79 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 FFAR4Q5NUL3 377 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 MRPL30Q8TCC3 161 aaKnown RBP10.2□□□□□ -0.78
USHBP1-201ENST00000252597 OR2W1Q9Y3N9 320 aa10.2□□□□□ -0.78
USHBP1-201ENST00000252597 HEATR1Q9H583 2144 aaKnown RBP10.19□□□□□ -0.78
USHBP1-201ENST00000252597 PINLYPA6NC86 204 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 GABRA2P47869 451 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 CYB561P49447 251 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 THBS3P49746 956 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 ID3Q02535 119 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 GCSAMLQ5JQS6 135 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 SLC35E3Q7Z769 313 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 IGLV3-12A0A075B6K2 115 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 SYNGR4O95473 234 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 CYB5R3P00387 301 aaPredicted RBP10.19□□□□□ -0.78
USHBP1-201ENST00000252597 COX6A1P12074 109 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 COL8A2P25067 703 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 PAX6P26367 422 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 EPHA8P29322 1005 aaPredicted RBP10.19□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF726P1Q15940 193 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 OR10G4Q8NGN3 311 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 OR10G9Q8NGN4 311 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 OR10G7Q8NGN6 311 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 ARFGEF3Q5TH69 2177 aa10.19□□□□□ -0.78
USHBP1-201ENST00000252597 WNT5AP41221 380 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 PKIAP61925 76 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 EXT1Q16394 746 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 GCNT2Q8N0V5 402 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 SPEM1Q8N4L4 309 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 LRTM2Q8N967 370 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 CHRNA10Q9GZZ6 450 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 DEFB127Q9H1M4 99 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 PROK2Q9HC23 129 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 DEPPQ9NTK1 212 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 VAX2Q9UIW0 290 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 UCP1P25874 307 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 OR3A1P47881 315 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 RAB4BP61018 213 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 TMEM41BQ5BJD5 291 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms