RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 HACD4Q5VWC8 232 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 DHRS7BQ6IAN0 325 aaPredicted RBP9.11□□□□□ -0.95
SF3B6-201ENST00000233468 CLVS1Q8IUQ0 354 aaPredicted RBP9.11□□□□□ -0.95
SF3B6-201ENST00000233468 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 OR2AK2Q8NG84 335 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 OR4F5Q8NH21 305 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 C17orf50Q8WW18 174 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 IL1F10Q8WWZ1 152 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 AJUBAQ96IF1 538 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 AKR1E2Q96JD6 320 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 DCSTAMPQ9H295 470 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
SF3B6-201ENST00000233468 IGHV3-43A0A0B4J1X8 118 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 GPR137BO60478 399 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 CTXN2P0C2S0 81 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 IGHV3-43DP0DP04 118 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 CTF1Q16619 201 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 MORN2Q502X0 79 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 PLA1AQ53H76 456 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 BAIAP2L2Q6UXY1 529 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 SLC25A48Q6ZT89 311 aaKnown RBP9.1□□□□□ -0.95
SF3B6-201ENST00000233468 OR10V1Q8NGI7 309 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 OR4A4PQ8NGN8 299 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 UBALD1Q8TB05 177 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 LEAP2Q969E1 77 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 ABCG5Q9H222 651 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 BEX1Q9HBH7 125 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 TCF19Q9Y242 345 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
SF3B6-201ENST00000233468 TRRAPQ9Y4A5 3859 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 TRAV18A0A075B6X5 111 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 LY6LH3BQJ8 138 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 ITGB1BP1O14713 200 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 FABP7O15540 132 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 XRCC3O43542 346 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 NDUFA7O95182 113 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 FCGR3AP08637 254 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 ZNF182P17025 639 aaPredicted RBP9.09□□□□□ -0.95
SF3B6-201ENST00000233468 TGFBR1P36897 503 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 CBX5P45973 191 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 ZNF816Q0VGE8 651 aaPredicted RBP9.09□□□□□ -0.95
SF3B6-201ENST00000233468 LY6EQ16553 131 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 AWAT1Q58HT5 328 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 Q6ZS49 121 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 C16orf82Q7Z2V1 217 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 THNSL2Q86YJ6 484 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 SAMD12Q8N8I0 201 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 OR52L2PQ8NGH6 319 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 OR5H6Q8NGV6 325 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 TAF15Q92804 592 aaKnown RBP eCLIP9.09□□□□□ -0.95
SF3B6-201ENST00000233468 HDHD3Q9BSH5 251 aaPredicted RBP9.09□□□□□ -0.95
SF3B6-201ENST00000233468 NPFFR1Q9GZQ6 430 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 PIPOXQ9P0Z9 390 aa9.09□□□□□ -0.95
SF3B6-201ENST00000233468 A0A1W2PPE3 182 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 M0QZK8 103 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 HSD17B6O14756 317 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 APOA1P02647 267 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 PPP1CCP36873 323 aaKnown RBP9.08□□□□□ -0.96
SF3B6-201ENST00000233468 CEACAM6P40199 344 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF137PP52743 207 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 RAG2P55895 527 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF260Q3ZCT1 412 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 TMEM69Q5SWH9 247 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 LDLRAD2Q5SZI1 272 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 TGIF2LXQ8IUE1 241 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 LYG1Q8N1E2 194 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 DYNAPQ8N1N2 210 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 ZNF439Q8NDP4 499 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 OR4C13Q8NGP0 309 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 OR10J5Q8NHC4 309 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 SGMS2Q8NHU3 365 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 SLC25A38Q96DW6 304 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 S1PR3Q99500 378 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 NAA50Q9GZZ1 169 aaKnown RBP9.08□□□□□ -0.96
SF3B6-201ENST00000233468 RANBP3Q9H6Z4 567 aaPredicted RBP9.08□□□□□ -0.96
SF3B6-201ENST00000233468 COMMD3Q9UBI1 195 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 SLC23A1Q9UHI7 598 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 VWFP04275 2813 aa9.08□□□□□ -0.96
SF3B6-201ENST00000233468 A6NDX4 124 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 TMEM235A6NFC5 223 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 RAB29O14966 203 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 SCTP09683 121 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 RAB13P51153 203 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 CT45A1Q5HYN5 189 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 OLFML2AQ68BL7 652 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 FAM71F2Q6NXP2 309 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 C11orf88Q6PI97 169 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 CT45A3Q8NHU0 189 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 PIFOQ8TCI5 191 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 C15orf40Q8WUR7 153 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 GINS4Q9BRT9 223 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 ST6GALNAC5Q9BVH7 336 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 C1RLQ9NZP8 487 aa9.07□□□□□ -0.96
SF3B6-201ENST00000233468 ADAM30Q9UKF2 790 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms