RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 KHDC3LQ587J8 217 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 DNAJB11Q9UBS4 358 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 ATP23Q9Y6H3 246 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 NKX2-6A6NCS4 301 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 TMEM14DPA8MWL7 114 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 SMPD2O60906 423 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 CCL1P22362 96 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 ERVFRD-1P60508 538 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 HMGN3Q15651 99 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 Q3ZCU0 254 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 ZNF324BQ6AW86 544 aaPredicted RBP9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 STX12Q86Y82 276 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.81
TNFAIP1-201ENST00000226225 H3BP45 60 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 PHF1O43189 567 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 SPRY3O43610 288 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 HOXA5P20719 270 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 MPV17P39210 176 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 CDX1P47902 265 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 TIMM23BQ5SRD1 257 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 CALHM1Q8IU99 346 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR2Z1Q8NG97 314 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 LINC01560Q8TB33 94 aa9.96□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGHV1-18A0A0C4DH31 117 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 CHRM2P08172 466 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 MMP9P14780 707 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 TMEM108Q6UXF1 575 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 CRIM1Q9NZV1 1036 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF107Q9UII5 783 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZFP92A6NM28 416 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 CDIPTO14735 213 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HS3ST1O14792 307 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 CGAP01215 116 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR5H8P0DN80 308 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 COX5AP20674 150 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 CEACAM8P31997 349 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 PSG7Q13046 419 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 SPIN3Q5JUX0 258 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF880Q6PDB4 577 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HEPN1Q6WQI6 88 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF429Q86V71 674 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 EMG1Q92979 244 aaKnown RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 WFIKKN1Q96NZ8 548 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 AK3Q9UIJ7 227 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ARHGAP21Q5T5U3 1957 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGHV2OR16-5A0A0B4J2B6 119 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 LOC390937A0A1W2PQ73 354 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 DANCRP0C864 163 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 NPBWR2P48146 333 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 GNG3P63215 75 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 RTN4IP1Q8WWV3 396 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 RDH5Q92781 318 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 LURAP1Q96LR2 239 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 VKORC1Q9BQB6 163 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 ABCA1O95477 2261 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 USF3Q68DE3 2245 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIVEP3Q5T1R4 2406 aa9.95□□□□□ -0.82
TNFAIP1-201ENST00000226225 RPS2P15880 293 aaKnown RBP9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 FAM189A2Q15884 450 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 C1orf162Q8NEQ5 155 aaPredicted RBP9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR5T1Q8NG75 326 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 HPSE2Q8WWQ2 592 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 C10orf35Q96D05 121 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 RTL8AQ9BWD3 113 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 KCNIP3Q9Y2W7 256 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 KALRNO60229 2985 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 RELNP78509 3460 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 TSTD3H0UI37 97 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 NXPH2O95156 264 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 GSTP1P09211 210 aaKnown RBP9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 TBPP20226 339 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 DDTP30046 118 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 TAS2R46P59540 309 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 RAB11AP62491 216 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR8B8Q15620 311 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 VAX1Q5SQQ9 334 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 TGIF2LXQ8IUE1 241 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 NGBQ9NPG2 151 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 SLC25A15Q9Y619 301 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGKV1-27A0A075B6S5 117 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 SYNGR1O43759 233 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 SSSCA1O60232 199 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 PGA5P0DJD9 388 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms