RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rab35Q6PHN9 201 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gal3st2Q6XQH0 394 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gpr89aQ8BS95 455 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 SptssaQ8R207 71 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Thyn1Q91YJ3 226 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tspan4Q9DCK3 238 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 SvilQ8K4L3 2170 aa16.3■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Sult4a1P63046 284 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Nkain3Q3URJ8 181 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tgoln1Q62313 353 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 RflnaQ7TS73 204 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Zpld1Q8BGZ8 415 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r193Q8R258 319 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r8Q8R2C2 303 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ergic1Q9DC16 290 aaKnown RBP16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 4930435E12RikA6X8Z9 381 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Zfp160E9Q459 650 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ifna1P01572 189 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Igf2P09535 180 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm21093Q6GQS8 569 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 EnkurQ6SP97 255 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr52Q8VFL0 319 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 SdhbQ9CQA3 282 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tomm40lQ9CZR3 308 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 SlirpQ9D8T7 112 aaKnown RBP16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Dkkl1Q9QZL9 230 aa16.29■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Igkv14-126A0A075B5K0 117 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm5901D3YVJ1 333 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Zfp229E9PWT2 705 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tbx15O70306 602 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ifna9P09235 190 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Cd79aP11911 220 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Perm1Q149B8 807 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Slc39a7Q31125 476 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Pate2Q3UW31 111 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr524Q7TRU0 318 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Cstl1Q80Y72 140 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tmprss11fQ8BHM9 439 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Exosc6Q8BTW3 273 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Vmn1r183Q8K3N5 305 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr1459Q8VFV9 307 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr56Q8VGD6 315 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Naa60Q9DBU2 242 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Ube2dnl2A2AFH2 155 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr69E9Q7C5 316 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Smr2O09133 150 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Rac1P63001 192 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tmem18Q3TUD9 140 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Kat7Q5SVQ0 613 aaKnown RBP16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Slc22a27Q76M72 551 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr890Q7TRD9 314 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Upk3bQ80YF6 275 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Skida1Q80YR3 822 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Prrg4Q8BGN6 226 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Wdr77Q99J09 342 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 NosipQ9D6T0 301 aaKnown RBP16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Elovl1Q9JLJ5 279 aa16.28■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm21488A0A087WR99 222 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm45808A0A1B0GSH8 263 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm7233E9PZI8 198 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Zfp764E9QAP1 431 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm15130F6PYN5 206 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm9732F6QVC4 198 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Olfr635K7N6B1 321 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm8104K7N744 198 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 IfnabL7MTU6 190 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Foxl2O88470 375 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 P01680 129 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Apoc1P34928 88 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 HhexP43120 271 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Tmem171Q4KL18 322 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Rsl1Q7M6Y1 485 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Pif1Q80SX8 650 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Nmnat3Q99JR6 245 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 GmfbQ9CQI3 142 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 SrpxQ9R0M3 464 aa16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Timm9Q9WV98 89 aaKnown RBP16.27■□□□□ 0.2
Shkbp1-201ENSMUST00000003857 Gm14403A2BFU4 402 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Siva1O54926 175 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Wfdc18P62810 74 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Hist1h2baP70696 127 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 TbceQ8CIV8 524 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr187Q8VEX6 308 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Slc25a22Q9D6M3 323 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp869Q9DC47 529 aa16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Rcl1Q9JJT0 373 aaKnown RBP16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Mecp2Q9Z2D6 484 aaKnown RBP16.27■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Gm42543A0A0G2JET4 117 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Vmn2r83E9Q0G7 864 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Q80W69 301 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Mfsd9Q8C0T7 466 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr827Q8VEV5 322 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1002Q8VFK2 318 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 MvkQ9R008 395 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zdhhc22A0PK84 263 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1029A2ATE0 324 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 1700015F17RikD3YUK8 150 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Gm3573L7N292 184 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Bcl6bO88282 474 aa16.26■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Cdx2P43241 311 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms