RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PRDX2P32119 198 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 RND3P61587 244 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 HLA-DRB3P79483 266 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TFF3Q07654 80 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 EDDM3AQ14507 147 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SMCO1Q147U7 214 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TESK1Q15569 626 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 ABCA11PQ4W5N1 156 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 IGSF11Q5DX21 431 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 FAM201AQ5SY85 155 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 C10orf91Q5T1B1 145 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 C5orf24Q7Z6I8 188 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PRR18Q8N4B5 295 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 GCSAMQ8N6F7 178 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 CCDC71LQ8N9Z2 235 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 DEFB108BQ8NET1 73 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PPP1R35Q8TAP8 253 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 PCNPQ8WW12 178 aaKnown RBP7.43□□□□□ -1.22
PHGDH-219ENST00000641513 IL1F10Q8WWZ1 152 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TOMM40LQ969M1 308 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 MOB3AQ96BX8 217 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SMIM8Q96KF7 97 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 NAA60Q9H7X0 242 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 SAP30LQ9HAJ7 183 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 MMP26Q9NRE1 261 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TAS2R3Q9NYW6 316 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 KCNIP1Q9NZI2 227 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
PHGDH-219ENST00000641513 CARHSP1Q9Y2V2 147 aaKnown RBP7.43□□□□□ -1.22
PHGDH-219ENST00000641513 KCNIP3Q9Y2W7 256 aa7.43□□□□□ -1.22
PHGDH-219ENST00000641513 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 C13orf42A0A1B0GVH6 325 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 DEFB108AA8MXU0 73 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 IFNL4K9M1U5 179 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 SIAH2O43255 324 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 PSPNO60542 156 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 DEDDO75618 318 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 JTBO76095 146 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 DIRAS3O95661 229 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 TK1P04183 234 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 CD55P08174 381 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF728P0DKX0 622 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 RCC1P18754 421 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-219ENST00000641513 AGAP20933 346 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 AADACP22760 399 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 GATA4P43694 442 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 BLOC1S1P78537 153 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF273Q14593 569 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 SLC9A3R2Q15599 337 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 EFNB3Q15768 340 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF672Q499Z4 452 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-219ENST00000641513 LRRC37A5PQ49AS3 106 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 KRBOX4Q5JUW0 171 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 GPR157Q5UAW9 335 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 SHEQ5VZ18 495 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF497Q6ZNH5 498 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 C20orf204Q6ZNR8 217 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 Q6ZPA2 131 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 MOB1BQ7L9L4 216 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 FAM90A1Q86YD7 464 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 SPAG16Q8N0X2 631 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 MUC15Q8N387 334 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 FAM71E2Q8N5Q1 922 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 COMMD1Q8N668 190 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 CD177Q8N6Q3 437 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 RRNAD1Q96FB5 475 aaKnown RBP7.42□□□□□ -1.22
PHGDH-219ENST00000641513 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ARV1Q9H2C2 271 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 MS4A5Q9H3V2 200 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 METTL8Q9H825 291 aaKnown RBP7.42□□□□□ -1.22
PHGDH-219ENST00000641513 LPAR3Q9UBY5 353 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 NBASA2RRP1 2371 aa7.42□□□□□ -1.22
PHGDH-219ENST00000641513 ZFYVE26Q68DK2 2539 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 ITPR1Q14643 2758 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 IGKV1D-17A0A075B6S4 117 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 NKX6-3A6NJ46 265 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 E5RGE8 158 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-219ENST00000641513 HSPA12AO43301 675 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 ADAP1O75689 374 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 CDS2O95674 445 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 GYPAP02724 150 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 CTXN2P0C2S0 81 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 FAM157CP0CG43 387 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 LMO1P25800 156 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 CFHR2P36980 270 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 OR3A1P47881 315 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 KCNJ3P48549 501 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 AESQ08117 197 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 RAB32Q13637 225 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 TMEM187Q14656 261 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 IAH1Q2TAA2 248 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-219ENST00000641513 TMEM268Q5VZI3 342 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 SLC35E4Q6ICL7 350 aa7.41□□□□□ -1.22
PHGDH-219ENST00000641513 LIAT1Q6ZQX7 453 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms