RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TMEM219Q86XT9 240 aa21.43■■□□□ 1.02
VEGFA-231ENST00000640499 ST6GALNAC6Q969X2 333 aa21.43■■□□□ 1.02
VEGFA-231ENST00000640499 ELF5Q9UKW6 265 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-231ENST00000640499 TSPAN9O75954 239 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 GNB3P16520 340 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 CEACAM3P40198 252 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 MORN2Q502X0 79 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 DHRS7BQ6IAN0 325 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-231ENST00000640499 LINC01006Q8NI28 216 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 OCSTAMPQ9BR26 566 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 ATG5Q9H1Y0 275 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 RIMS4Q9H426 269 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-231ENST00000640499 CHMP1AQ9HD42 196 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-231ENST00000640499 Q9N2K0 584 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 OR2S2Q9NQN1 319 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 ABCB10Q9NRK6 738 aa21.42■■□□□ 1.02
VEGFA-231ENST00000640499 A0A1W2PPI3 338 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 OOSP1A8MZH6 123 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 TFAP2AP05549 437 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 ALDH3B2P48448 385 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 NCS1P62166 190 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 HTD2P86397 168 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 MADCAM1Q13477 382 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 TMEM30BQ3MIR4 351 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 Q3ZCU0 254 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 IDNKQ5T6J7 187 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 SLC25A48Q6ZT89 311 aaKnown RBP21.41■■□□□ 1.02
VEGFA-231ENST00000640499 OR4F5Q8NH21 305 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 SETD6Q8TBK2 473 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 CMSS1Q9BQ75 279 aaKnown RBP21.41■■□□□ 1.02
VEGFA-231ENST00000640499 NAA50Q9GZZ1 169 aaKnown RBP21.41■■□□□ 1.02
VEGFA-231ENST00000640499 GNG12Q9UBI6 72 aa21.41■■□□□ 1.02
VEGFA-231ENST00000640499 AMMECR1Q9Y4X0 333 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-231ENST00000640499 HIST1H1DP16402 221 aaKnown RBP21.4■■□□□ 1.02
VEGFA-231ENST00000640499 PPP1CCP36873 323 aaKnown RBP21.4■■□□□ 1.02
VEGFA-231ENST00000640499 OR10X1Q8NGY0 326 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 CFHR4Q92496 578 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 RPEQ96AT9 228 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 SLC25A38Q96DW6 304 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 MRPS26Q9BYN8 205 aaKnown RBP21.4■■□□□ 1.02
VEGFA-231ENST00000640499 C16orf95Q9H693 158 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 RAB9BQ9NP90 201 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 C12orf4Q9NQ89 552 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 JPT1Q9UK76 154 aa21.4■■□□□ 1.02
VEGFA-231ENST00000640499 CLPSL1A2RUU4 121 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 METTL21EPA6NDL7 271 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 FAM90A9PA6NNJ1 464 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 SCTP09683 121 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 LIAT1Q6ZQX7 453 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 MOB1BQ7L9L4 216 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 TOMM40LQ969M1 308 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 GALMQ96C23 342 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF747Q9BV97 191 aa21.39■■□□□ 1.01
VEGFA-231ENST00000640499 IGKV1-6A0A0C4DH72 117 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 YPEL1O60688 119 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 KRTAP10-3P60369 221 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 ODF3L1Q8IXM7 274 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 C3orf56Q8N813 242 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 YPEL2Q96QA6 119 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 PARP12Q9H0J9 701 aaKnown RBP21.38■■□□□ 1.01
VEGFA-231ENST00000640499 BEX1Q9HBH7 125 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 SIGLEC9Q9Y336 463 aa21.38■■□□□ 1.01
VEGFA-231ENST00000640499 A0A075B6Q4 140 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 TIMM23O14925 209 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 REG1BP48304 166 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF137PP52743 207 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 VBP1P61758 197 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 HLA-DRB3P79483 266 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 LY6G6FQ5SQ64 297 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 CCDC144NLQ6NUI1 221 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 DRAM1Q8N682 238 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.37■■□□□ 1.019e-6■□□□□ 9.4
VEGFA-231ENST00000640499 RHBDL2Q9NX52 303 aa21.37■■□□□ 1.01
VEGFA-231ENST00000640499 POM121CA8CG34 1229 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 HSD17B6O14756 317 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 BRS3P32247 399 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 SCAND1P57086 179 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 PROK1P58294 105 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 SRSF4Q08170 494 aaKnown RBP21.36■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF816Q0VGE8 651 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-231ENST00000640499 CTF1Q16619 201 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 STEAP3Q658P3 488 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 Q6ZS46 218 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 ANKRD13BQ86YJ7 626 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 IL1F10Q8WWZ1 152 aa21.36■■□□□ 1.01
VEGFA-231ENST00000640499 RBMXL1Q96E39 390 aaKnown RBP21.36■■□□□ 1.01
VEGFA-231ENST00000640499 FCGR3AP08637 254 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 KIR2DS4P43632 304 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 RAB7AP51149 207 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 HABP2Q14520 560 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-231ENST00000640499 HERPUD1Q15011 391 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 CDNFQ49AH0 187 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 OR56B4Q8NH76 319 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF702PQ9H963 129 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 RAB18Q9NP72 206 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 ABRACLQ9P1F3 81 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 OR1A1Q9P1Q5 309 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF230Q9UIE0 474 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-231ENST00000640499 PITPNC1Q9UKF7 332 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 SPATA2Q9UM82 520 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms