RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KRASP01116 189 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 BMP5P22003 454 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 CD200P41217 278 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 LHX2P50458 406 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 SPNS3Q6ZMD2 512 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 UBE2L5PA0A1B0GUS4 154 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 H0Y980 276 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 CLDN1O95832 211 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 IGHV2-5P01817 119 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 PAX6P26367 422 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 TAS2R30P59541 319 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 ARL16Q0P5N6 197 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 SSPNQ14714 243 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 KRTAP27-1Q3LI81 207 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 CLDND2Q8NHS1 167 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 CYC1P08574 325 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 IDH3GP51553 393 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-221ENST00000640341 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCARB2-221ENST00000640341 ELOBQ15370 118 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 LTC4SQ16873 150 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 COLCA1Q6ZS62 124 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 GCNT2Q8N0V5 402 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF703Q9H7S9 590 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-221ENST00000640341 SYNGR2O43760 224 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 MT-CO3P00414 261 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 DEFA4P12838 97 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 CEACAM6P40199 344 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 WNT5AP41221 380 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 CLDN18P56856 261 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 GNG3P63215 75 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 S100A12P80511 92 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF816Q0VGE8 651 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-221ENST00000640341 TMEM251Q8N6I4 163 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 FAM173AQ9BQD7 235 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 GGACTQ9BVM4 153 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 RNF115Q9Y4L5 304 aa12.41□□□□□ -0.42
SCARB2-221ENST00000640341 NXPH2O95156 264 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 OR5A2Q8NGI9 324 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 TCEAL7Q9BRU2 100 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 LY86O95711 162 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 CELA3BP08861 270 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 S100PP25815 95 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 HLA-DRB3P79483 266 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 BAXQ07812 192 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 IL24Q13007 206 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 SSX7Q7RTT5 188 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 GPR61Q9BZJ8 451 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 DFFBO76075 338 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 NKX6-1P78426 367 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-221ENST00000640341 ALKBH6Q3KRA9 238 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 TPRX1Q8N7U7 411 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 OR5P3Q8WZ94 311 aa12.4□□□□□ -0.42
SCARB2-221ENST00000640341 RPUSD4Q96CM3 377 aaKnown RBP12.4□□□□□ -0.42
SCARB2-221ENST00000640341 RBMXL1Q96E39 390 aaKnown RBP12.4□□□□□ -0.42
SCARB2-221ENST00000640341 IGKV1-39P01597 117 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 IGKV1D-39P04432 117 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 CD55P08174 381 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 ADIRFQ15847 76 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 SSX3Q99909 188 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 CHD3Q12873 2000 aaKnown RBP12.39□□□□□ -0.43
SCARB2-221ENST00000640341 KIAA1549Q9HCM3 1950 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 HBE1P02100 147 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 LINC00205P59089 165 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-221ENST00000640341 MDP1Q86V88 176 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 LINC00469Q8N7U9 141 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 OR2J1Q9GZK6 312 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 LAMA5O15230 3695 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 IGHEP01854 428 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-221ENST00000640341 BTNL3Q6UXE8 466 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 TMPRSS7Q7RTY8 843 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 DEFB123Q8N688 67 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 PFDN5Q99471 154 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 SLC25A22Q9H936 323 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
SCARB2-221ENST00000640341 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 OR2H2O95918 312 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 FABP4P15090 132 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 PMELP40967 661 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 PMP22Q01453 160 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 EDARADDQ8WWZ3 215 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-221ENST00000640341 GAR1Q9NY12 217 aaKnown RBP12.38□□□□□ -0.43
SCARB2-221ENST00000640341 IL17BQ9UHF5 180 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 IGKV1-5P01602 117 aa12.38□□□□□ -0.43
SCARB2-221ENST00000640341 HSPB1P04792 205 aaKnown RBP12.38□□□□□ -0.43
SCARB2-221ENST00000640341 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms