RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SCML1Q9UN30 329 aa-2.16□□□□□ -2.76
LMBR1-222ENST00000638959 TIMM9Q9Y5J7 89 aa-2.16□□□□□ -2.76
LMBR1-222ENST00000638959 F8P00451 2351 aa-2.16□□□□□ -2.76
LMBR1-222ENST00000638959 J3QLI3 93 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 MAGEB3O15480 346 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CLTAP09496 248 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CALRP27797 417 aaKnown RBP-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 FAM3AP98173 230 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 DRAM2Q6UX65 266 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 SLC13A5Q86YT5 568 aaPredicted RBP-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 C3orf56Q8N813 242 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CNEP1R1Q8N9A8 125 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 OR10Z1Q8NGY1 313 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CCDC110Q8TBZ0 833 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 ZFAND1Q8TCF1 268 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 TOP1MTQ969P6 601 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CCDC47Q96A33 483 aaKnown RBP-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CHID1Q9BWS9 393 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 RIBC2Q9H4K1 309 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 CRLF2Q9HC73 371 aa-2.17□□□□□ -2.76
LMBR1-222ENST00000638959 PTPRQQ9UMZ3 2332 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 ANAPC1Q9H1A4 1944 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 TRAV1-1A0A0B4J248 108 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 LOC107984156A0A0G2JMH3 177 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 A0A1B0GWJ7 208 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 KRT87PA6NCN2 255 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 OR11H12B2RN74 326 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 NDC80O14777 642 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 PEX11AO75192 247 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 ZMPSTE24O75844 475 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 CD160O95971 181 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 CST1P01037 141 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 CCL3P10147 92 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 DEFA4P12838 97 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 BRS3P32247 399 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 RNASE4P34096 147 aaKnown RBP-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 RAB25P57735 213 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 RAB10P61026 200 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 INAQ16352 499 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 SLC8B1Q6J4K2 584 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 PRR15Q8IV56 129 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 APRG1Q8IVJ8 170 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 ARL17AQ8IVW1 177 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 CA13Q8N1Q1 262 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 TTC29Q8NA56 475 aaPredicted RBP-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 PLPP5Q8NEB5 264 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 OR11H2Q8NH07 326 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 TMA16Q96EY4 203 aaKnown RBP-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 VAT1Q99536 393 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 AGMATQ9BSE5 352 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 SLC7A5P2Q9GIP4 190 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 ACER3Q9NUN7 267 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 FIS1Q9Y3D6 152 aa-2.18□□□□□ -2.76
LMBR1-222ENST00000638959 SCAF11Q99590 1463 aaKnown RBP-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 IRGMA1A4Y4 181 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 NUPR2A6NF83 97 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 OR51F1A6NGY5 319 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 H7C2G1 150 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 SDCBPO00560 298 aaPredicted RBP-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 TXNDC9O14530 226 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 PTTG1O95997 202 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 EIF2S2P20042 333 aaKnown RBP-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 M6PRP20645 277 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 ARL2P36404 184 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 EMP1P54849 157 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 RPL18AQ02543 176 aaKnown RBP-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 PDGFRLQ15198 375 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 TAF7Q15545 349 aaPredicted RBP-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 LPCAT4Q643R3 524 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 CCL17Q92583 94 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 RILPQ96NA2 401 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 POMKQ9H5K3 350 aa-2.19□□□□□ -2.76
LMBR1-222ENST00000638959 USH2AO75445 5202 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 TRAV8-3A0A0A6YYJ7 113 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 H3BP45 60 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 TCAPO15273 167 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 CCL25O15444 150 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 HSP90AA1P07900 732 aaKnown RBP-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 NPPCP23582 126 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 ALDH3A1P30838 453 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 MPV17LQ2QL34 196 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 NDUFAF6Q330K2 333 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 IDNKQ5T6J7 187 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 HES3Q5TGS1 186 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 PRAMEF5Q5TYX0 476 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 PRAMEF6Q5VXH4 476 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 SMCR5Q8TEV8 140 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 TUBGCP3Q96CW5 907 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 FMC1Q96HJ9 113 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 YIPF3Q9GZM5 350 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 C1orf21Q9H246 121 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 MCUBQ9NWR8 336 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 TAAR3PQ9P1P4 343 aa-2.2□□□□□ -2.76
LMBR1-222ENST00000638959 STAB2Q8WWQ8 2551 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 ZNF292O60281 2723 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 IGHV2OR16-5A0A0B4J2B6 119 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 C2orf70A6NJV1 201 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 CPLX1O14810 134 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 DNAL4O96015 105 aa-2.21□□□□□ -2.76
LMBR1-222ENST00000638959 CA2P00918 260 aa-2.21□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms