RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 HSD17B6O14756 317 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 SOCS1O15524 211 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
LINC00339-207ENST00000634712 VDAC2P45880 294 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-207ENST00000634712 VEGFCP49767 419 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 Q8N2B8 174 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 FAM89BQ8N5H3 189 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 OR56B1Q8NGI3 324 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 STUB1Q9UNE7 303 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 NBEAL1Q6ZS30 2694 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 M0QZK8 103 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 RGS11O94810 467 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 TMEM11P17152 192 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 REG1BP48304 166 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 OR10A3P58181 314 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-207ENST00000634712 KCTD21Q4G0X4 260 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 ABCA11PQ4W5N1 156 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-207ENST00000634712 JPT1Q9UK76 154 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 HSF4Q9ULV5 492 aa12.56□□□□□ -0.4
LINC00339-207ENST00000634712 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 A0A1W2PPI3 338 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 IFITM5A6NNB3 132 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 FAM90A9PA6NNJ1 464 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-207ENST00000634712 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
LINC00339-207ENST00000634712 HTD2P86397 168 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 HNF4GQ14541 408 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 MORN2Q502X0 79 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 SLC25A48Q6ZT89 311 aaKnown RBP12.55□□□□□ -0.4
LINC00339-207ENST00000634712 MOB1BQ7L9L4 216 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 OR52L2PQ8NGH6 319 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 CYYR1Q96J86 154 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
LINC00339-207ENST00000634712 AK3Q9UIJ7 227 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
LINC00339-207ENST00000634712 SHISA3A0PJX4 238 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 SLC31A2O15432 143 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 TXNL1O43396 289 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 NAPSAO96009 420 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 IGKV1D-33P01593 117 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 IGKV1-33P01594 117 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 PPP1CCP36873 323 aaKnown RBP12.54□□□□□ -0.4
LINC00339-207ENST00000634712 HMGN3Q15651 99 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 NEDD8Q15843 81 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 C2orf68Q2NKX9 166 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 CT45A1Q5HYN5 189 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 Q6ZS46 218 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 CT45A3Q8NHU0 189 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 CFHR4Q92496 578 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 ARHGAP5-AS1Q96IT6 56 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
LINC00339-207ENST00000634712 PECRQ9BY49 303 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
LINC00339-207ENST00000634712 TRRAPQ9Y4A5 3859 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 YPEL1O60688 119 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 GADD45AP24522 165 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF134P52741 427 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 TMEM50BP56557 158 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-207ENST00000634712 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF439Q8NDP4 499 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
LINC00339-207ENST00000634712 YPEL2Q96QA6 119 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 ABHD14AQ9BUJ0 271 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
LINC00339-207ENST00000634712 NOTOA8MTQ0 251 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 LDLRAD4O15165 306 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 FBXO24O75426 580 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 CSF1P09603 554 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 RAB6AP20340 208 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 GNMTQ14749 295 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 ZNF880Q6PDB4 577 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 OR2AK2Q8NG84 335 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 RAB3CQ96E17 227 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 KCTD7Q96MP8 289 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 HDHD3Q9BSH5 251 aaPredicted RBP12.52□□□□□ -0.41
LINC00339-207ENST00000634712 OR51E2Q9H255 320 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 MMP27Q9H306 513 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
LINC00339-207ENST00000634712 TET2Q6N021 2002 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-207ENST00000634712 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms