RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 MT-ND4P03905 459 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 OR5H8P0DN80 308 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 GP9P14770 177 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 GABRB1P18505 474 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 BLVRBP30043 206 aaPredicted RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 ZNF93P35789 620 aaPredicted RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 ADARB1P78563 741 aaKnown RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 RUNX1Q01196 453 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 SRSF7Q16629 238 aaKnown RBP eCLIP8.48□□□□□ -1.054e-17■■■■■ 29.4
LINC00963-214ENST00000622680 ECSCRQ19T08 205 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 SLC22A6Q4U2R8 563 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 SYT6Q5T7P8 510 aaPredicted RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 HAPLN4Q86UW8 402 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 OR13C5Q8NGS8 318 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 DLX4Q92988 240 aaPredicted RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 MRPL20Q9BYC9 149 aaKnown RBP8.48□□□□□ -1.05
LINC00963-214ENST00000622680 OR51J1Q9H342 316 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 FBXO7Q9Y3I1 522 aa8.48□□□□□ -1.05
LINC00963-214ENST00000622680 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 A0A087WW49 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 IGHV7-81A0A0B4J1V7 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 SNTNA6NMZ2 147 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 H3BNX3 289 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 SPINT2O43291 252 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 HLA-DRB1P01911 266 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 CD2P06729 351 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 LIMS3P0CW19 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 LIMS4P0CW20 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 RCC1P18754 421 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-214ENST00000622680 GBX2P52951 348 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ACTBP60709 375 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 NDPQ00604 133 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 RCN1Q15293 331 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 LRRC36Q1X8D7 754 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 MPV17LQ2QL34 196 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ADAMTSL5Q6ZMM2 481 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 LINC00596Q86U02 117 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ZNF429Q86V71 674 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 CBR4Q8N4T8 237 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 OR52I1Q8NGK6 324 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 GPR148Q8TDV2 347 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ARPC1AQ92747 370 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 S100A13Q99584 98 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ZNF184Q99676 751 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-214ENST00000622680 ANKRD60Q9BZ19 345 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 TRAPPC2LQ9UL33 140 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 GMPPBQ9Y5P6 360 aa8.47□□□□□ -1.05
LINC00963-214ENST00000622680 NBR2O15453 112 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 LANCL1O43813 399 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 SOX15O60248 233 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 FADS2O95864 444 aaKnown RBP8.46□□□□□ -1.06
LINC00963-214ENST00000622680 BDKRB2P30411 391 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 PPP1CCP36873 323 aaKnown RBP8.46□□□□□ -1.06
LINC00963-214ENST00000622680 RAB9AP51151 201 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 PPP3R1P63098 170 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 MRPL28Q13084 256 aaKnown RBP8.46□□□□□ -1.06
LINC00963-214ENST00000622680 Q3ZCU0 254 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 C6orf183Q5T699 404 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 OR2G6Q5TZ20 316 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 STX19Q8N4C7 294 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 OR52L2PQ8NGH6 319 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 CITED4Q96RK1 184 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 ZMAT4Q9H898 229 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 TMEM138Q9NPI0 162 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 ETAA1Q9NY74 926 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 RCC2Q9P258 522 aaKnown RBP8.46□□□□□ -1.06
LINC00963-214ENST00000622680 A3GALT2U3KPV4 340 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.06
LINC00963-214ENST00000622680 A0A1W2PN81 502 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 FAM90A10PA6NDY2 464 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 LINC01619G3V211 115 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 IGHV3-11P01762 117 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 GTF2F2P13984 249 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 CHRNA7P36544 502 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 OR3A3P47888 321 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 ALDH3A2P51648 485 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 RAB40BQ12829 278 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 RIPK1Q13546 671 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 C5orf64Q2M2E5 130 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 C19orf54Q5BKX5 351 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 RAB12Q6IQ22 244 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 APH1BQ8WW43 257 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 MUL1Q969V5 352 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 NABP2Q9BQ15 211 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 ZNF251Q9BRH9 671 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 ABHD14AQ9BUJ0 271 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 C9orf16Q9BUW7 83 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 TOLLIPQ9H0E2 274 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 BANF2Q9H503 90 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 OR2S2Q9NQN1 319 aa8.45□□□□□ -1.06
LINC00963-214ENST00000622680 PAK1IP1Q9NWT1 392 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-214ENST00000622680 MRPS28Q9Y2Q9 187 aaKnown RBP8.45□□□□□ -1.06
LINC00963-214ENST00000622680 TRAV8-7A0A075B6U6 113 aa8.44□□□□□ -1.06
LINC00963-214ENST00000622680 SAA2-SAA4A0A096LPE2 208 aa8.44□□□□□ -1.06
LINC00963-214ENST00000622680 UBE2QL1A1L167 161 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms