RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ORC6Q9Y5N6 252 aa2.54□□□□□ -2
BRCA1-229ENST00000621897 C2orf16Q68DN1 1984 aa2.54□□□□□ -2
BRCA1-229ENST00000621897 SCN2AQ99250 2005 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PTPRJQ12913 1337 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 IGHV7-81A0A0B4J1V7 117 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TRAV8-2A0A0B4J237 113 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TRAV8-6A0A0B4J262 113 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 A0A1W2PRE2 83 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ARL5CA6NH57 179 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 FAM183AA6NL82 134 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 EEF1E1-BLOC1S5C9J1V9 151 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 H7C417 338 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 AGPAT2O15120 278 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 EEF1E1O43324 174 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 PDCD6O75340 191 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 WISP3O95389 354 aaPredicted RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 IFNA10P01566 189 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 IGHV3-48P01763 117 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 EIF4EP06730 217 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 PFN1P07737 140 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 HTR1AP08908 422 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ERGP11308 486 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 NELFEP18615 380 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 CXCL3P19876 107 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PRTN3P24158 256 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PSMD8P48556 350 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 RAB13P51153 203 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TIMM10P62072 90 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 RUNX1Q01196 453 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 DEFA6Q01524 100 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 INCA1Q0VD86 236 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PMAIP1Q13794 54 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TSPO2Q5TGU0 170 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 FBXW9Q5XUX1 488 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 NANOGP8Q6NSW7 305 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 LPCAT3Q6P1A2 487 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 DCUN1D2Q6PH85 259 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ALKAL1Q6UXT8 129 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 SCGB1D4Q6XE38 83 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ZNF550Q7Z398 422 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 NAA40Q86UY6 237 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ZNF567Q8N184 647 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 SLC35F6Q8N357 371 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 C11orf72Q8NBR9 251 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 OR51A2Q8NGJ7 313 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 OR51S1Q8NGJ8 323 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 OR5J2Q8NH18 312 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 OR1S1Q8NH92 325 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ZNF420Q8TAQ5 688 aaPredicted RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 GHSRQ92847 366 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TMEM203Q969S6 136 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 BMFQ96LC9 184 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PPP1R2P1Q96PQ5 205 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 NRTNQ99748 197 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 TCEAL7Q9BRU2 100 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 SLIRPQ9GZT3 109 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 SH3BGRL3Q9H299 93 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 CISHQ9NSE2 258 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 MED29Q9NX70 200 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 ZNF226Q9NYT6 803 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 MTFP1Q9UDX5 166 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 SS18L2Q9UHA2 77 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 GLS2Q9UI32 602 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 PSG8Q9UQ74 426 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
BRCA1-229ENST00000621897 CAMTA1Q9Y6Y1 1673 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 THSD7BQ9C0I4 1608 aa2.53□□□□□ -2
BRCA1-229ENST00000621897 GRIN2BQ13224 1484 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 NPHP4O75161 1426 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 PTPRKQ15262 1439 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 SMG6Q86US8 1419 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CHD2O14647 1828 aaKnown RBP2.52□□□□□ -2.01
BRCA1-229ENST00000621897 IGHV1OR15-1A0A075B7D0 117 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM150BA6NC51 233 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR5H1A6NKK0 313 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 FAM25AB3EWG3 89 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 FAM25CB3EWG5 89 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 FAM25GB3EWG6 89 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C5orf58C9J3I9 102 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C8orf87E5RJ46 101 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 E7EQ34 232 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 TRAPPC2LH3BP13 241 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 UPK2O00526 184 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 XKRYO14609 159 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 NDUFS5O43920 106 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR2A4O95047 310 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 GADD45GO95257 159 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 EPPINO95925 133 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C1QBP02746 253 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 C1QCP02747 245 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 REG1AP05451 166 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 ATP5G1P05496 136 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 RBP1P09455 135 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 OR56A5P0C7T3 313 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 SPNP16150 400 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CXCL2P19875 107 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 RAB3BP20337 219 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 CDK2P24941 298 aa2.52□□□□□ -2.01
BRCA1-229ENST00000621897 GGT2P36268 569 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms