RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 MYPOPQ86VE0 399 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 VKORC1L1Q8N0U8 176 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 PRR7Q8TB68 274 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 DTD1Q8TEA8 209 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 MOB3AQ96BX8 217 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 MMP24Q9Y5R2 645 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 WDFY3Q8IZQ1 3526 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 HEATR5BQ9P2D3 2071 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 UNC13CQ8NB66 2214 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 E9PLN8 166 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 CD59P13987 128 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 TUSC1Q2TAM9 212 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 ZIC4Q8N9L1 334 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 OR5D13Q8NGL4 314 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 ITLN1Q8WWA0 313 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 SSMEM1Q8WWF3 244 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM45BQ96B21 275 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 RARRES2Q99969 163 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 SUB1P53999 127 aaKnown RBP eCLIP7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 HFEQ30201 348 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 GGNQ86UU5 652 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM222Q9H0R3 208 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 KIAA1456Q9P272 454 aa7.65□□□□□ -1.19
PDLIM5-222ENST00000615540 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 SPINK4O60575 86 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 FBP1P09467 338 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 FHITP49789 147 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 KCNMB1Q16558 191 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 RSG1Q9BU20 258 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 SLC35B3Q9H1N7 401 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 SAP30LQ9HAJ7 183 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 PITX3O75364 302 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 NEURL1O76050 574 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 MT-ND4LP03901 98 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 ATP6V0CP27449 155 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 NHLRC3Q5JS37 347 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 WDYHV1Q96HA8 205 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 IGLV3-32A0A0A0MS00 114 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 DVL1O14640 695 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 CLDN14O95500 239 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 MBP02144 154 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 RBP4P02753 201 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 SNRPEP62304 92 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM201AQ5SY85 155 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 ABLIM2Q6H8Q1 611 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF645Q8N7E2 425 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 POC1AQ8NBT0 407 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 BLNKQ8WV28 456 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 BORCS7Q96B45 105 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1D-8A0A087WSZ0 117 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 MRPS11P82912 194 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF90Q03938 601 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 STPG2Q8N412 459 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 C15orf54Q8N8G6 183 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 GPR146Q96CH1 333 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 RBKSQ9H477 322 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 PNRC2Q9NPJ4 139 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 AURKAIP1Q9NWT8 199 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 LAMP3Q9UQV4 416 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 MSGN1A6NI15 193 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 GLIPR1P48060 266 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 IL24Q13007 206 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 TRAT1Q6PIZ9 186 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 BAGE3Q86Y29 109 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 BAGE2Q86Y30 109 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 NABP1Q96AH0 204 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 UBTD1Q9HAC8 227 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 WSB1Q9Y6I7 421 aa7.64□□□□□ -1.19
PDLIM5-222ENST00000615540 RAB4AP20338 218 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 SSTR5P35346 364 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 RAB7AP51149 207 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 GABRA6Q16445 453 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 KCNIP2Q9NS61 270 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 H7BYZ3 331 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CT45A6P0DMU7 189 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CT45A5P0DMU8 189 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CT45A7P0DMV0 189 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM41BQ5BJD5 291 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CT45A1Q5HYN5 189 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 OR8G5Q8NG78 346 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CT45A3Q8NHU0 189 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CABLES2Q9BTV7 478 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CACNA1CQ13936 2221 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 PROB1E7EW31 1015 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF735P0CB33 412 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 VDAC1P21796 283 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 SULT1A1P50225 295 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM117AQ9C073 453 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF665Q9H7R5 613 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1-27A0A075B6S5 117 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 OR4A8P0C604 315 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 CHRNB4P30926 498 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 KIR2DS2P43631 304 aa7.63□□□□□ -1.19
PDLIM5-222ENST00000615540 GALR1P47211 349 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms