RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 GEMIN2O14893 280 aaKnown RBP9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 SPINT2O43291 252 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 CA11O75493 328 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 ARL6IP5O75915 188 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 MPIG6BO95866 241 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 IGHV3-7P01780 117 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 IGHG2P01859 326 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 CD1BP29016 333 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 MYCNOSP40205 109 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 RPL23AP62750 156 aaKnown RBP9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 HNF4GQ14541 408 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 SLC22A6Q4U2R8 563 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 C1orf100Q5SVJ3 147 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 C6orf183Q5T699 404 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 GLT8D1Q68CQ7 371 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 AWAT2Q6E213 333 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 GLIPR1L1Q6UWM5 242 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 TGIF2LXQ8IUE1 241 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 IZUMO1Q8IYV9 350 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 OR8H1Q8NGG4 311 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 LIN7CQ9NUP9 197 aaKnown RBP9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 TRAPPC2LQ9UL33 140 aa9.62□□□□□ -0.87
PDLIM2-218ENST00000614502 TRDV1A0A1B0GX56 115 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 A0A1W2PP11 408 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 FAM90A10PA6NDY2 464 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 FAM90A7PA6NKC0 464 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 NCBP2LA6PVI3 153 aaKnown RBP9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 FAM90A23PA8MXZ1 464 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 C15orf65H3BRN8 121 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 AP4M1O00189 453 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 GLAP06280 429 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 GALP22466 123 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 PSMB9P28065 219 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 UTF1Q5T230 341 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 TEX38Q6PEX7 206 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF497Q6ZNH5 498 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF329Q86UD4 541 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 STPG2Q8N412 459 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 GFOD1Q9NXC2 390 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 GHRLQ9UBU3 117 aa9.61□□□□□ -0.87
PDLIM2-218ENST00000614502 TRAV39A0A0B4J263 110 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 SLC22A1O15245 554 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 TNFAIP8O95379 198 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 MOSP00540 346 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 MT-ND4P03905 459 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 THBS3P49746 956 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 DIAPH2-AS1Q14236 149 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 SYT6Q5T7P8 510 aaPredicted RBP9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 CCDC107Q8WV48 283 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 RTN4IP1Q8WWV3 396 aaPredicted RBP9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 EAF1Q96JC9 268 aaPredicted RBP9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 GFI1Q99684 422 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 RASL11BQ9BPW5 248 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 ABCG5Q9H222 651 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 ETAA1Q9NY74 926 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF581Q9P0T4 197 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 RCC2Q9P258 522 aaKnown RBP9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 GNG12Q9UBI6 72 aa9.6□□□□□ -0.87
PDLIM2-218ENST00000614502 TRAV1-2A0A0B4J238 106 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 A0A1W2PPE3 182 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 K7EIL1 84 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 UBBP0CG47 229 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 MGMTP16455 207 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 HTR2CP28335 458 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 FGF9P31371 208 aaPredicted RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF137PP52743 207 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 PNLIPRP3Q17RR3 467 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 DEFB121Q5J5C9 76 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 OR2W3Q7Z3T1 314 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF554Q86TJ5 538 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 ZNF695Q8IW36 515 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 MRPL41Q8IXM3 137 aaKnown RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 OR6M1Q8NGM8 313 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 Q96M66 194 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 NOL4LQ96MY1 436 aaPredicted RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 CHCHD6Q9BRQ6 235 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 BANF2Q9H503 90 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 KCNIP1Q9NZI2 227 aa9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 AK6Q9Y3D8 172 aaKnown RBP9.59□□□□□ -0.87
PDLIM2-218ENST00000614502 A0A087WXM4 84 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 SHISA3A0PJX4 238 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 SLC17A2O00624 439 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 CRTAPO75718 401 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 ELANEP08246 267 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 OR5H8P0DN80 308 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 VSIG8P0DPA2 414 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 FUT3P21217 361 aa9.58□□□□□ -0.88
PDLIM2-218ENST00000614502 GPR12P47775 334 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms