RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
USE1-208ENST00000600970 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 ISG20L2Q9H9L3 353 aaKnown RBP12.89□□□□□ -0.35
USE1-208ENST00000600970 TAS2R4Q9NYW5 299 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 EXOGQ9Y2C4 368 aaKnown RBP12.89□□□□□ -0.35
USE1-208ENST00000600970 FBXO7Q9Y3I1 522 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 E9PI62 339 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 NBR2O15453 112 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 SPINT2O43291 252 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 SERPINA2P20848 420 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 FASP25445 335 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 NDPQ00604 133 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
USE1-208ENST00000600970 LIN54Q6MZP7 749 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 PRR18Q8N4B5 295 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 MRPL48Q96GC5 212 aaKnown RBP12.88□□□□□ -0.35
USE1-208ENST00000600970 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
USE1-208ENST00000600970 A0A1W2PP11 408 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 HBZP02008 142 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 HSPB1P04792 205 aaKnown RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 SOX2P48431 317 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 TMEM30BQ3MIR4 351 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 SLC25A30Q5SVS4 291 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 STEAP3Q658P3 488 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 ODF3L1Q8IXM7 274 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 SYS1Q8N2H4 156 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 STX19Q8N4C7 294 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 OR4K15Q8NH41 348 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 SLC7A6OSQ96CW6 309 aaPredicted RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 JAM3Q9BX67 310 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 CST11Q9H112 138 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 FOXA2Q9Y261 457 aaPredicted RBP12.87□□□□□ -0.35
USE1-208ENST00000600970 ERGIC3Q9Y282 383 aa12.87□□□□□ -0.35
USE1-208ENST00000600970 NDUFA3O95167 84 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 ADARB1P78563 741 aaKnown RBP12.86□□□□□ -0.35
USE1-208ENST00000600970 HAGHQ16775 308 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 MORN2Q502X0 79 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 C6orf183Q5T699 404 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 MEDAGQ5VYS4 303 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 NPBQ8NG41 125 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 RGP1Q92546 391 aaPredicted RBP12.86□□□□□ -0.35
USE1-208ENST00000600970 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
USE1-208ENST00000600970 ARSBP15848 533 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
USE1-208ENST00000600970 SNRPGP62308 76 aaKnown RBP12.85□□□□□ -0.35
USE1-208ENST00000600970 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 TCTEX1D1Q8N7M0 179 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
USE1-208ENST00000600970 S100A13Q99584 98 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 RSRP1Q9BUV0 290 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 PAK1IP1Q9NWT1 392 aaPredicted RBP12.85□□□□□ -0.35
USE1-208ENST00000600970 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
USE1-208ENST00000600970 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 AASSQ9UDR5 926 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
USE1-208ENST00000600970 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 IFNA6P05013 189 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 EGR2P11161 476 aaPredicted RBP12.84□□□□□ -0.35
USE1-208ENST00000600970 GTF2F2P13984 249 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
USE1-208ENST00000600970 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
USE1-208ENST00000600970 GNMTQ14749 295 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 LRRC36Q1X8D7 754 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 ZNF660Q6AZW8 331 aaPredicted RBP12.84□□□□□ -0.35
USE1-208ENST00000600970 TRAT1Q6PIZ9 186 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 GAPTQ8N292 157 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 RHOVQ96L33 236 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 TMEM138Q9NPI0 162 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 OR2S2Q9NQN1 319 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
USE1-208ENST00000600970 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
USE1-208ENST00000600970 ZNF780AO75290 641 aaPredicted RBP12.83□□□□□ -0.36
USE1-208ENST00000600970 GTF2A1P52655 376 aaPredicted RBP12.83□□□□□ -0.36
USE1-208ENST00000600970 GBX2P52951 348 aaPredicted RBP12.83□□□□□ -0.36
USE1-208ENST00000600970 CX3CL1P78423 397 aa12.83□□□□□ -0.36
USE1-208ENST00000600970 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
USE1-208ENST00000600970 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
USE1-208ENST00000600970 C5orf24Q7Z6I8 188 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms