RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	NICN1	Q9BSH3	213 aa		10.08	□□□□□ -0.8
FKRP-223	ENST00000600872	TAF9B	Q9HBM6	251 aa		10.08	□□□□□ -0.8
FKRP-223	ENST00000600872	TRAPPC2L	Q9UL33	140 aa		10.08	□□□□□ -0.8
FKRP-223	ENST00000600872	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.08	□□□□□ -0.8
FKRP-223	ENST00000600872	DNAH9	Q9NYC9	4486 aa		10.08	□□□□□ -0.8
FKRP-223	ENST00000600872		A0A1W2PRX2	142 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	TCRBV4S1A1T	A0A5B7	111 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	MPIG6B	O95866	241 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	CD1B	P29016	333 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	RPS25	P62851	125 aa	Known RBP	10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	HES1	Q14469	280 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	MED22	Q15528	200 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	TMEM30B	Q3MIR4	351 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	MORN2	Q502X0	79 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	C6orf183	Q5T699	404 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	ZNF880	Q6PDB4	577 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	CEACAM19	Q7Z692	300 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	MOB3B	Q86TA1	216 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	ZNF329	Q86UD4	541 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	OR10V1	Q8NGI7	309 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	PHF21A	Q96BD5	680 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	ISYNA1	Q9NPH2	558 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	SCN3B	Q9NY72	215 aa		10.07	□□□□□ -0.8
FKRP-223	ENST00000600872	SPINT2	O43291	252 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	NAPSA	O96009	420 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	UBB	P0CG47	229 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	CPE	P16870	476 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	F2RL1	P55085	397 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	HTD2	P86397	168 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	HMGN3	Q15651	99 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	HSD17B12	Q53GQ0	312 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	C9orf152	Q5JTZ5	239 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	RBM48	Q5RL73	367 aa	Known RBP	10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	LY6G6F	Q5SQ64	297 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	GLT8D1	Q68CQ7	371 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	TRAT1	Q6PIZ9	186 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	C18orf65	Q6ZTR6	163 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	PRSS48	Q7RTY5	328 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	C6orf201	Q7Z4U5	140 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	TGIF2LX	Q8IUE1	241 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	PRR18	Q8N4B5	295 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	FAM89B	Q8N5H3	189 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	FAM71E2	Q8N5Q1	922 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	OR4X2	Q8NGF9	303 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	OR52L2P	Q8NGH6	319 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	TMEM203	Q969S6	136 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	FAAP24	Q9BTP7	215 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	CST11	Q9H112	138 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	LPAR5	Q9H1C0	372 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	ABCG5	Q9H222	651 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	GNG12	Q9UBI6	72 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	LINC00527	Q9UJ94	153 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	TPRKB	Q9Y3C4	175 aa		10.06	□□□□□ -0.8
FKRP-223	ENST00000600872	PSMB11	A5LHX3	300 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	RGS10	O43665	173 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	LANCL1	O43813	399 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	IGLL1	P15814	213 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	MAP2K4	P45985	399 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	TMEM50B	P56557	158 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	MLLT11	Q13015	90 aa	Predicted RBP	10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	STPG2	Q8N412	459 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	SVOP	Q8N4V2	548 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	OR2T10	Q8NGZ9	312 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	UFD1	Q92890	307 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	RITA1	Q96K30	269 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	TMEM59	Q9BXS4	323 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	OR2S2	Q9NQN1	319 aa		10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	LIN7C	Q9NUP9	197 aa	Known RBP	10.05	□□□□□ -0.8
FKRP-223	ENST00000600872	SHISA3	A0PJX4	238 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	SLC17A2	O00624	439 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	LDLRAD4	O15165	306 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	SOCS1	O15524	211 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	YPEL1	O60688	119 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	BPNT1	O95861	308 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	MOS	P00540	346 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	PPP1CC	P36873	323 aa	Known RBP	10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	GPR12	P47775	334 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	RPL23A	P62750	156 aa	Known RBP	10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	FABP5	Q01469	135 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	CFHR3	Q02985	330 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	LSAMP	Q13449	338 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	SSX1	Q16384	188 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	NKAPL	Q5M9Q1	402 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	FOXB2	Q5VYV0	432 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	SLC35E3	Q7Z769	313 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	LINC00482	Q8N8I6	264 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	OR6M1	Q8NGM8	313 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	KCNG3	Q8TAE7	436 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	CHPT1	Q8WUD6	406 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	YPEL2	Q96QA6	119 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	S1PR3	Q99500	378 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	HSPB9	Q9BQS6	159 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	ZNF251	Q9BRH9	671 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	JPT1	Q9UK76	154 aa		10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	AK6	Q9Y3D8	172 aa	Known RBP	10.04	□□□□□ -0.8
FKRP-223	ENST00000600872	TRBV6-6	A0A0A6YYG2	114 aa		10.03	□□□□□ -0.8
FKRP-223	ENST00000600872	TXNL1	O43396	289 aa		10.03	□□□□□ -0.8
FKRP-223	ENST00000600872	IL3RA	P26951	378 aa		10.03	□□□□□ -0.8

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