RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, human

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-223	ENST00000600552	KCNIP1	Q9NZI2	227 aa		13.78	□□□□□ -0.2
SHKBP1-223	ENST00000600552	ZMAT5	Q9UDW3	170 aa	Known RBP	13.78	□□□□□ -0.2
SHKBP1-223	ENST00000600552	SEC14L6	B5MCN3	397 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MGMT	P16455	207 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RPS11	P62280	158 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ST3GAL4	Q11206	333 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	GNMT	Q14749	295 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	KIR2DS1	Q14954	304 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MMD	Q15546	238 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF439	Q8NDP4	499 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ASCL2	Q99929	193 aa		13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF107	Q9UII5	783 aa	Predicted RBP	13.77	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TRBV5-7	A0A0A0MS05	114 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TXNL1	O43396	289 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	GPX5	O75715	221 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	LY86	O95711	162 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ELANE	P08246	267 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FUT3	P21217	361 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	PPP1CC	P36873	323 aa	Known RBP	13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CAPG	P40121	348 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CDX1	P47902	265 aa	Predicted RBP	13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	GP2	P55259	537 aa	Known RBP	13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	DCTN2	Q13561	401 aa	Known RBP	13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	C9orf66	Q5T8R8	295 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TMEM65	Q6PI78	240 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR8H1	Q8NGG4	311 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	PGLYRP3	Q96LB9	341 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	WWC2-AS2	Q96NR7	200 aa		13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RCC2	Q9P258	522 aa	Known RBP	13.76	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CEL	P19835	753 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CNTFR	P26992	372 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	LSAMP	Q13449	338 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF260	Q3ZCT1	412 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TTC23	Q5W5X9	447 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	DHRSX	Q8N5I4	330 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FAM71E2	Q8N5Q1	922 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	SETD9	Q8NE22	299 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MRPS24	Q96EL2	167 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RITA1	Q96K30	269 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RDH12	Q96NR8	316 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552	PARP11	Q9NR21	331 aa		13.75	□□□□□ -0.21
SHKBP1-223	ENST00000600552		G3V318	75 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RAMP3	O60896	148 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FST	P19883	344 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR3A3	P47888	321 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ACTB	P60709	375 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552		Q3ZCU0	254 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MORN2	Q502X0	79 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TRAT1	Q6PIZ9	186 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR11H1	Q8NG94	326 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	SETD6	Q8TBK2	473 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	DERL3	Q96Q80	235 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF251	Q9BRH9	671 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ABHD14A	Q9BUJ0	271 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MRPL20	Q9BYC9	149 aa	Known RBP	13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	KLK15	Q9H2R5	256 aa		13.74	□□□□□ -0.21
SHKBP1-223	ENST00000600552	EBAG9	O00559	213 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MYL12B	O14950	172 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	LANCL1	O43813	399 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	IGHG4	P01861	327 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CFHR3	Q02985	330 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	SIGIRR	Q6IA17	410 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR10K2	Q6IF99	312 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	AHSA2	Q719I0	299 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	C4orf3	Q8WVX3	66 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552		Q96M66	194 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	GNB4	Q9HAV0	340 aa		13.73	□□□□□ -0.21
SHKBP1-223	ENST00000600552	EFCAB10	A6NFE3	127 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	PDCD6	O75340	191 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF137P	P52743	207 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TAS2R43	P59537	309 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	DOC2B	Q14184	412 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TMEM30B	Q3MIR4	351 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ZNF485	Q8NCK3	441 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	BPIFB6	Q8NFQ5	453 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR1N2	Q8NGR9	330 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	MRPL30	Q8TCC3	161 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ABHD5	Q8WTS1	349 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	IL1F10	Q8WWZ1	152 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	NEDD4L	Q96PU5	975 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FAAP24	Q9BTP7	215 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ANKRD60	Q9BZ19	345 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	SCOC	Q9UIL1	159 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	A3GALT2	U3KPV4	340 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552		U3KQK5	164 aa		13.72	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FAM90A10P	A6NDY2	464 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FAM90A7P	A6NKC0	464 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	FAM90A23P	A8MXZ1	464 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ATP6V0E1	O15342	81 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	CA11	O75493	328 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR5H8	P0DN80	308 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	PSMB8	P28062	276 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	INSL4	Q14641	139 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	ECSCR	Q19T08	205 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	RNF152	Q8N8N0	203 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	OR51J1	Q9H342	316 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	KIAA1456	Q9P272	454 aa		13.71	□□□□□ -0.21
SHKBP1-223	ENST00000600552	TRAV41	A0A0B4J266	112 aa		13.7	□□□□□ -0.22
SHKBP1-223	ENST00000600552	NBR2	O15453	112 aa		13.7	□□□□□ -0.22

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