RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SNAPC3Q92966 411 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 GALMQ96C23 342 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 CABLES2Q9BTV7 478 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 SCPEP1Q9HB40 452 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 RAB9BQ9NP90 201 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 OR1A1Q9P1Q5 309 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 SONP18583 2426 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 SULT1C2O00338 296 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 SRP14P37108 136 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 CBX5P45973 191 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 GNG10P50151 68 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 UBE2E1P51965 193 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 HTD2P86397 168 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNF79Q15937 498 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 BEST4Q8NFU0 473 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 OR11H6Q8NGC7 330 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 CLEC7AQ9BXN2 247 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 IFT46Q9NQC8 304 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 OR2S2Q9NQN1 319 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 GNG12Q9UBI6 72 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNF69Q9UC07 566 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 NUP50Q9UKX7 468 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 HIVEP2P31629 2446 aa16.29■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 ODF3BA8MYP8 253 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 CTDSPLO15194 276 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 SLC31A2O15432 143 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 NAT1P18440 290 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 HNF1AP20823 631 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 PPP1CCP36873 323 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 ETV6P41212 452 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 TMEM30BQ3MIR4 351 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 LDLRAD2Q5SZI1 272 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNF626Q68DY1 528 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 BCL6BQ8N143 479 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 C15orf40Q8WUR7 153 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 PARP12Q9H0J9 701 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 RABL2AQ9UBK7 228 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 KLK11Q9UBX7 282 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 SLC23A1Q9UHI7 598 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 ANXA10Q9UJ72 324 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 RABL2BQ9UNT1 228 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 PSG11Q9UQ72 335 aa16.28■□□□□ 0.2
SHKBP1-222ENST00000600320 GABARAPH6UMI1 98 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 NPFFO15130 113 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 ARG1P05089 322 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 MORN2Q502X0 79 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 TEX29Q8N6K0 151 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNF439Q8NDP4 499 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 OR9G1Q8NH87 305 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 SMIM4Q8WVI0 70 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 BEX2Q9BXY8 128 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 CDC42EP3Q9UKI2 254 aa16.27■□□□□ 0.2
SHKBP1-222ENST00000600320 FN1P02751 2386 aaKnown RBP16.27■□□□□ 0.19
SHKBP1-222ENST00000600320 BET1O15155 118 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 YPEL1O60688 119 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 IGLV1-47P01700 117 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 ZNF134P52741 427 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 MRPS10P82664 201 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 STEAP3Q658P3 488 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 LHFPL4Q7Z7J7 247 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 LYSMD2Q8IV50 215 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 OR4P4Q8NGL7 312 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 FCAMRQ8WWV6 532 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 C22orf15Q8WYQ4 148 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 AJUBAQ96IF1 538 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 YPEL2Q96QA6 119 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 MTFP1Q9UDX5 166 aa16.26■□□□□ 0.19
SHKBP1-222ENST00000600320 TRBV6-7A0A0A0MS04 114 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 J3QR06 171 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 GSTZ1O43708 216 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 EPHA1P21709 976 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 RCVRNP35243 200 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 SAA4P35542 130 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 HLA-DRB5Q30154 266 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 CHRFAM7AQ494W8 412 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 CT45A1Q5HYN5 189 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 SPANXN2Q5MJ10 180 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 MFSD4AQ8N468 514 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 CT45A3Q8NHU0 189 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 SRRQ9GZT4 340 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 AKIP1Q9NQ31 210 aa16.25■□□□□ 0.19
SHKBP1-222ENST00000600320 NF1P21359 2839 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 TOR1AO14656 332 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 HSPA12AO43301 675 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 LANCL1O43813 399 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 CRLF1O75462 422 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 ZBTB25P24278 435 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 PTBP1P26599 531 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 HLA-DMAP28067 261 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 CEACAM6P40199 344 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 PYDC2Q56P42 97 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 BEND2Q8NDZ0 799 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 ZNF596Q8TC21 504 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 MS4A7Q9GZW8 240 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 TOLLIPQ9H0E2 274 aa16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 RDH8Q9NYR8 311 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms