RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 C8orf31Q8N9H6 132 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 ST6GALNAC6Q969X2 333 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 KCTD7Q96MP8 289 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 ZNF702PQ9H963 129 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 BEX1Q9HBH7 125 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 ABCB10Q9NRK6 738 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 ELF5Q9UKW6 265 aaPredicted RBP8.93□□□□□ -0.98
VRK3-210ENST00000596121 RNF114Q9Y508 228 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 TIMM23O14925 209 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 SNRPBP14678 240 aaKnown RBP8.92□□□□□ -0.98
VRK3-210ENST00000596121 GNB3P16520 340 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 RAB6AP20340 208 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 PPP1CCP36873 323 aaKnown RBP8.92□□□□□ -0.98
VRK3-210ENST00000596121 KIR2DS4P43632 304 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 REG1BP48304 166 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 MADCAM1Q13477 382 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 MORN2Q502X0 79 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 SFXN4Q6P4A7 337 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 SLC25A48Q6ZT89 311 aaKnown RBP8.92□□□□□ -0.98
VRK3-210ENST00000596121 DRAM1Q8N682 238 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 OR56B1Q8NGI3 324 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 OR5H6Q8NGV6 325 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 OR10R2Q8NGX6 335 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 PARP12Q9H0J9 701 aaKnown RBP8.92□□□□□ -0.98
VRK3-210ENST00000596121 GNG12Q9UBI6 72 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 DAPK2Q9UIK4 370 aa8.92□□□□□ -0.98
VRK3-210ENST00000596121 IGKV1-6A0A0C4DH72 117 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 A0A1B0GUS0 222 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 SH2D7A6NKC9 451 aaPredicted RBP8.91□□□□□ -0.98
VRK3-210ENST00000596121 OOSP1A8MZH6 123 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 ZNF736B4DX44 427 aaPredicted RBP8.91□□□□□ -0.98
VRK3-210ENST00000596121 HAX1O00165 279 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 MFNGO00587 321 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 AMY1AP04745 511 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 AMY2AP04746 511 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 SCTP09683 121 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 CEACAM3P40198 252 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 LSM3P62310 102 aaKnown RBP8.91□□□□□ -0.98
VRK3-210ENST00000596121 HTD2P86397 168 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 TRAT1Q6PIZ9 186 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 SHISA2Q6UWI4 295 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 LIAT1Q6ZQX7 453 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 ZNF554Q86TJ5 538 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 ODF3L1Q8IXM7 274 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 Q8N2B8 174 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 OR10X1Q8NGY0 326 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 OR56B4Q8NH76 319 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 SETD6Q8TBK2 473 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 TOMM40LQ969M1 308 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 PTX4Q96A99 478 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 RPEQ96AT9 228 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 CREB3L1Q96BA8 519 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 RAB3CQ96E17 227 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 CHMP1AQ9HD42 196 aaPredicted RBP8.91□□□□□ -0.98
VRK3-210ENST00000596121 Q9N2K0 584 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 OR2S2Q9NQN1 319 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 SERTAD4Q9NUC0 356 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 AMMECR1Q9Y4X0 333 aaPredicted RBP8.91□□□□□ -0.98
VRK3-210ENST00000596121 PKD1L1Q8TDX9 2849 aa8.91□□□□□ -0.98
VRK3-210ENST00000596121 MGAM2Q2M2H8 2515 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 A0A075B6Q4 140 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 IGHV3-72A0A0B4J1Y9 119 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 IGHV1-3A0A0C4DH29 117 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 HSD17B6O14756 317 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 AIREO43918 545 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 SNRNP70P08621 437 aaKnown RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 BRS3P32247 399 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 RPS19P39019 145 aaKnown RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 ZNF816Q0VGE8 651 aaPredicted RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 TMEM95Q3KNT9 176 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 Q3ZCU0 254 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 OR13F1Q8NGS4 319 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 LGALS14Q8TCE9 139 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 CAPSLQ8WWF8 208 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 RBM14Q96PK6 669 aaKnown RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 CITED1Q99966 193 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 CMSS1Q9BQ75 279 aaKnown RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 NPFFR1Q9GZQ6 430 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 ATG5Q9H1Y0 275 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 RIMS4Q9H426 269 aaPredicted RBP8.9□□□□□ -0.98
VRK3-210ENST00000596121 OR1A1Q9P1Q5 309 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 JPT1Q9UK76 154 aa8.9□□□□□ -0.98
VRK3-210ENST00000596121 NBEAL1Q6ZS30 2694 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 VWFP04275 2813 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 IGKV1D-8A0A087WSZ0 117 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 YPEL1O60688 119 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 OR2F2O95006 317 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 HIST1H1DP16402 221 aaKnown RBP8.89□□□□□ -0.99
VRK3-210ENST00000596121 MNDAP41218 407 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 OR3A3P47888 321 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 RAB7AP51149 207 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 ZNF137PP52743 207 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 HLA-DRB3P79483 266 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 HNF4GQ14541 408 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 TMEM30BQ3MIR4 351 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms