RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZNF554Q86TJ5 538 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 DRAM1Q8N682 238 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 OR10V1Q8NGI7 309 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 OR56B4Q8NH76 319 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 OR2T6Q8NHC8 308 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 CT45A3Q8NHU0 189 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 RPEQ96AT9 228 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 ARHGAP5-AS1Q96IT6 56 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 HDHD3Q9BSH5 251 aaPredicted RBP8.78□□□□□ -1
SHKBP1-206ENST00000595523 OR51E2Q9H255 320 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 LIN7BQ9HAP6 207 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 AK3Q9UIJ7 227 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 STUB1Q9UNE7 303 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 PLXNB1O43157 2135 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 PDCD5O14737 125 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 HSD17B6O14756 317 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 OR2F2O95006 317 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 SNRNP70P08621 437 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 SLC2A2P11168 524 aaPredicted RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 PPP1CCP36873 323 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 MNDAP41218 407 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 REG1BP48304 166 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 VEGFCP49767 419 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB7AP51149 207 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 PSMD7P51665 324 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 ZNF137PP52743 207 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 ZNF816Q0VGE8 651 aaPredicted RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 NEDD8Q15843 81 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 TMEM95Q3KNT9 176 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 TMEM30BQ3MIR4 351 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 Q3ZCU0 254 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 KLHDC1Q8N7A1 406 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 OR52L2PQ8NGH6 319 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 OR10X1Q8NGY0 326 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 WIPF2Q8TF74 440 aaPredicted RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 RBMXL1Q96E39 390 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 RBM14Q96PK6 669 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 SLC25A33Q9BSK2 321 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 URM1Q9BTM9 101 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 PECRQ9BY49 303 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 RNF167Q9H6Y7 350 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 PLEKHJ1Q9NW61 149 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 GNG12Q9UBI6 72 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 HSF4Q9ULV5 492 aa8.77□□□□□ -1.01
SHKBP1-206ENST00000595523 NOTCH3Q9UM47 2321 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 IGHV1-3A0A0C4DH29 117 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 SH2D7A6NKC9 451 aaPredicted RBP8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 GADD45AP24522 165 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 ARHGDIBP52566 201 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 HTD2P86397 168 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 MORN2Q502X0 79 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 C16orf82Q7Z2V1 217 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 THNSL2Q86YJ6 484 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 ODF3L1Q8IXM7 274 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 OR8H3Q8N146 312 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 OR56B1Q8NGI3 324 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 CAPSLQ8WWF8 208 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 RTN4IP1Q8WWV3 396 aaPredicted RBP8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 CHCHD6Q9BRQ6 235 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 PRSS22Q9GZN4 317 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 WNT10AQ9GZT5 417 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 OR2S2Q9NQN1 319 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 KCNIP1Q9NZI2 227 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 JPT1Q9UK76 154 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB22AQ9UL26 194 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 KCNK7Q9Y2U2 307 aa8.76□□□□□ -1.01
SHKBP1-206ENST00000595523 IGHV3-72A0A0B4J1Y9 119 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB27BO00194 218 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 VSIG10L2P0DP72 767 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 EBI3Q14213 229 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 HERPUD1Q15011 391 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 C11orf88Q6PI97 169 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 Q6ZTK2 550 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 MOB1BQ7L9L4 216 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 CENPOQ9BU64 300 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 PARP12Q9H0J9 701 aaKnown RBP8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 CHMP1AQ9HD42 196 aaPredicted RBP8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB9BQ9NP90 201 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 SSR3Q9UNL2 185 aa8.75□□□□□ -1.01
SHKBP1-206ENST00000595523 TRIM64CA6NLI5 447 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 NOTOA8MTQ0 251 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 ZNF736B4DX44 427 aaPredicted RBP8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 MFNGO00587 321 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 YPEL1O60688 119 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 TSPAN15O95858 294 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 IGKV1D-33P01593 117 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 IGKV1-33P01594 117 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 GAPDHP04406 335 aaKnown RBP8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 FAM106CPP0CH98 169 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 CD36P16671 472 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 RAB6AP20340 208 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 SDC2P34741 201 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 ABCA11PQ4W5N1 156 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 LY6G6FQ5SQ64 297 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 STEAP3Q658P3 488 aa8.74□□□□□ -1.01
SHKBP1-206ENST00000595523 TPRA1Q86W33 373 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms