RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 WSB1Q9Y6I7 421 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 SMAD5-AS1Q9Y6J3 95 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 TRAV8-7A0A075B6U6 113 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 TRBV5-5A0A0J9YX44 114 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 MCRIP1C9JLW8 97 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 OGG1O15527 345 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 LANCL1O43813 399 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
LIG1-205ENST00000593425 OR8U8P0C7N1 319 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 OR5H8P0DN80 308 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 ZNF616Q08AN1 781 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 GNMTQ14749 295 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 ODF3L1Q8IXM7 274 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 GAPTQ8N292 157 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 MUL1Q969V5 352 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 SMIM19Q96E16 107 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 RITA1Q96K30 269 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
LIG1-205ENST00000593425 IGLV1-40P01703 118 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 INSL3P51460 131 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 ACTBP60709 375 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 RUNX1Q01196 453 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 TMEM30BQ3MIR4 351 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 MORN2Q502X0 79 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 ZFP1Q6P2D0 407 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 TMEM65Q6PI78 240 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 GLIPR1L1Q6UWM5 242 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 C9orf16Q9BUW7 83 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 OR51J1Q9H342 316 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 RAB9BQ9NP90 201 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 ISYNA1Q9NPH2 558 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 PARP11Q9NR21 331 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 VSIG4Q9Y279 399 aa12.69□□□□□ -0.38
LIG1-205ENST00000593425 MRPS28Q9Y2Q9 187 aaKnown RBP12.69□□□□□ -0.38
LIG1-205ENST00000593425 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 GPX5O75715 221 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 SC5DO75845 299 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 HLA-DRB1P01911 266 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
LIG1-205ENST00000593425 GPR176Q14439 515 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 ZFP41Q8N8Y5 198 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 OR52L2PQ8NGH6 319 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 GHSRQ92847 366 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 RCHY1Q96PM5 261 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 CHCHD6Q9BRQ6 235 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 MRPL20Q9BYC9 149 aaKnown RBP12.68□□□□□ -0.38
LIG1-205ENST00000593425 ALX4Q9H161 411 aaPredicted RBP12.68□□□□□ -0.38
LIG1-205ENST00000593425 BANF2Q9H503 90 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 TAF9BQ9HBM6 251 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 OR2S2Q9NQN1 319 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
LIG1-205ENST00000593425 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 FAM90A10PA6NDY2 464 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 OVOL1O14753 267 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 NBR2O15453 112 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 FSTP19883 344 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 DCKP27707 260 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 BLVRBP30043 206 aaPredicted RBP12.67□□□□□ -0.38
LIG1-205ENST00000593425 RAB9AP51151 201 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 NDPQ00604 133 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 Q499Y3 187 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 DMKNQ6E0U4 476 aaPredicted RBP12.67□□□□□ -0.38
LIG1-205ENST00000593425 AWAT2Q6E213 333 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 SIGIRRQ6IA17 410 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 TRAT1Q6PIZ9 186 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 OVCH2Q7RTZ1 564 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 MRPS24Q96EL2 167 aaKnown RBP12.67□□□□□ -0.38
LIG1-205ENST00000593425 PGLYRP3Q96LB9 341 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 ABHD14AQ9BUJ0 271 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 ANKRD60Q9BZ19 345 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 MBNL3Q9NUK0 354 aaKnown RBP12.67□□□□□ -0.38
LIG1-205ENST00000593425 BABAM2Q9NXR7 383 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 CLEC2DQ9UHP7 191 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 FBXO7Q9Y3I1 522 aa12.67□□□□□ -0.38
LIG1-205ENST00000593425 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 A0A1W2PPK0 400 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 UBE2QL1A1L167 161 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 MGMTP16455 207 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 PPP1CCP36873 323 aaKnown RBP12.66□□□□□ -0.38
LIG1-205ENST00000593425 SLURP1P55000 103 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 YIF1BQ5BJH7 314 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 ZNF429Q86V71 674 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
LIG1-205ENST00000593425 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
LIG1-205ENST00000593425 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 OR14A2Q96R54 314 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 ZNF251Q9BRH9 671 aa12.66□□□□□ -0.38
LIG1-205ENST00000593425 SELENOIQ9C0D9 397 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms