RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
CLIP3-205ENST00000592017 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 HSD17B6O14756 317 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 TIMM23O14925 209 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
CLIP3-205ENST00000592017 IL3RAP26951 378 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 FGF9P31371 208 aaPredicted RBP11.16□□□□□ -0.62
CLIP3-205ENST00000592017 EFNB2P52799 333 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 HABP2Q14520 560 aaPredicted RBP11.16□□□□□ -0.62
CLIP3-205ENST00000592017 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 NR2C2APQ86WQ0 139 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 OR56B1Q8NGI3 324 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 RNF167Q9H6Y7 350 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 RAB22AQ9UL26 194 aa11.16□□□□□ -0.62
CLIP3-205ENST00000592017 A0A087WXM4 84 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 NOTOA8MTQ0 251 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 LDLRAD4O15165 306 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
CLIP3-205ENST00000592017 TSPAN15O95858 294 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
CLIP3-205ENST00000592017 RAB7AP51149 207 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 MXD1Q05195 221 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 HES1Q14469 280 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 HMGN3Q15651 99 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 Q6ZTK2 550 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 MOB3BQ86TA1 216 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 FAM89BQ8N5H3 189 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 DRAM1Q8N682 238 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 OR52L2PQ8NGH6 319 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 GALMQ96C23 342 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 KCTD7Q96MP8 289 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 SLC25A33Q9BSK2 321 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 PECRQ9BY49 303 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 MMP27Q9H306 513 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 ABRACLQ9P1F3 81 aa11.15□□□□□ -0.62
CLIP3-205ENST00000592017 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 A0A075B6Q4 140 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
CLIP3-205ENST00000592017 NAPSAO96009 420 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 SNRNP70P08621 437 aaKnown RBP11.14□□□□□ -0.63
CLIP3-205ENST00000592017 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 SDC2P34741 201 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 TMEM50BP56557 158 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
CLIP3-205ENST00000592017 DEFA6Q01524 100 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 Q6ZPA2 131 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 OR8H3Q8N146 312 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF439Q8NDP4 499 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 RAB3CQ96E17 227 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 AKR1E2Q96JD6 320 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 CMSS1Q9BQ75 279 aaKnown RBP11.14□□□□□ -0.63
CLIP3-205ENST00000592017 OCSTAMPQ9BR26 566 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 C12orf4Q9NQ89 552 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 DAPK2Q9UIK4 370 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 HSF4Q9ULV5 492 aa11.14□□□□□ -0.63
CLIP3-205ENST00000592017 OR2F2O95006 317 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 IGKV1D-33P01593 117 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 IGKV1-33P01594 117 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 GAPDHP04406 335 aaKnown RBP11.13□□□□□ -0.63
CLIP3-205ENST00000592017 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 TMEM11P17152 192 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 RAB6AP20340 208 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 BLCAPP62952 87 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF816Q0VGE8 651 aaPredicted RBP11.13□□□□□ -0.63
CLIP3-205ENST00000592017 HERPUD1Q15011 391 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 Q3ZCU0 254 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 CT45A1Q5HYN5 189 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 SFXN4Q6P4A7 337 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 SLC25A48Q6ZT89 311 aaKnown RBP11.13□□□□□ -0.63
CLIP3-205ENST00000592017 C16orf82Q7Z2V1 217 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 TPRA1Q86W33 373 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 C11orf44Q8N8P7 122 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 DTX3Q8N9I9 347 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 CT45A3Q8NHU0 189 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 CFHR4Q92496 578 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 CENPOQ9BU64 300 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 ABHD14AQ9BUJ0 271 aa11.13□□□□□ -0.63
CLIP3-205ENST00000592017 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms