RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	MADCAM1	Q13477	382 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	NEDD8	Q15843	81 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867		Q3ZCU0	254 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	ZNF554	Q86TJ5	538 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	PRR18	Q8N4B5	295 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	DRAM1	Q8N682	238 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	OR52L2P	Q8NGH6	319 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	OR4C13	Q8NGP0	309 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	TOMM40L	Q969M1	308 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	RPE	Q96AT9	228 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	ARHGAP5-AS1	Q96IT6	56 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	OCSTAMP	Q9BR26	566 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	URM1	Q9BTM9	101 aa	Known RBP	13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	PECR	Q9BY49	303 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	HSF4	Q9ULV5	492 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	TRBV6-6	A0A0A6YYG2	114 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	PDCD5	O14737	125 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	SPINT2	O43291	252 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	GADD45A	P24522	165 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	MYL9	P24844	172 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	BRS3	P32247	399 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	REG1B	P48304	166 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	ZNF137P	P52743	207 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	TMEM95	Q3KNT9	176 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	MORN2	Q502X0	79 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	TRAT1	Q6PIZ9	186 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	THNSL2	Q86YJ6	484 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	OR10X1	Q8NGY0	326 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	OR56B4	Q8NH76	319 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	RBM14	Q96PK6	669 aa	Known RBP	13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	PLEKHJ1	Q9NW61	149 aa		13.81	□□□□□ -0.2
MBD1-221	ENST00000589867	RAB27B	O00194	218 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	HSD17B6	O14756	317 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	OR2F2	O95006	317 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	SNRNP70	P08621	437 aa	Known RBP	13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	CLEC2L	P0C7M8	214 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	CCDC144NL	Q6NUI1	221 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	ODF3L1	Q8IXM7	274 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	OR8H3	Q8N146	312 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	SLC25A33	Q9BSK2	321 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	WNT10A	Q9GZT5	417 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	LIN7B	Q9HAP6	207 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	GNG12	Q9UBI6	72 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	RAB22A	Q9UL26	194 aa		13.8	□□□□□ -0.2
MBD1-221	ENST00000589867	IGHV1-3	A0A0C4DH29	117 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	SH2D7	A6NKC9	451 aa	Predicted RBP	13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	TRIM64C	A6NLI5	447 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	PPP1CC	P36873	323 aa	Known RBP	13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	MNDA	P41218	407 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	RAB7A	P51149	207 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	HTD2	P86397	168 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	EBI3	Q14213	229 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	TMEM30B	Q3MIR4	351 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	C16orf82	Q7Z2V1	217 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	KLHDC1	Q8N7A1	406 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	OR2T6	Q8NHC8	308 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	CAPSL	Q8WWF8	208 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	CHCHD6	Q9BRQ6	235 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	CENPO	Q9BU64	300 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	PARP12	Q9H0J9	701 aa	Known RBP	13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	OR2S2	Q9NQN1	319 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	SSR3	Q9UNL2	185 aa		13.79	□□□□□ -0.2
MBD1-221	ENST00000589867	NOTCH1	P46531	2555 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	IGHV3-72	A0A0B4J1Y9	119 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	NOTO	A8MTQ0	251 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	ZNF736	B4DX44	427 aa	Predicted RBP	13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	CD36	P16671	472 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	RAB6A	P20340	208 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	LY6G6F	Q5SQ64	297 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	STEAP3	Q658P3	488 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867		Q6ZTK2	550 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867		Q8N6K4	173 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	OR56B1	Q8NGI3	324 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	PRSS22	Q9GZN4	317 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867		Q9N2K0	584 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	KCNIP1	Q9NZI2	227 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	JPT1	Q9UK76	154 aa		13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	TET2	Q6N021	2002 aa	Predicted RBP	13.78	□□□□□ -0.2
MBD1-221	ENST00000589867	MEGF8	Q7Z7M0	2845 aa		13.77	□□□□□ -0.2
MBD1-221	ENST00000589867	IGKV1-6	A0A0C4DH72	117 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	MFNG	O00587	321 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	YPEL1	O60688	119 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	GAPDH	P04406	335 aa	Known RBP	13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	SDC2	P34741	201 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	TSPAN14	Q8NG11	270 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	YIPF6	Q96EC8	236 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	YPEL2	Q96QA6	119 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	RAB9B	Q9NP90	201 aa		13.77	□□□□□ -0.21
MBD1-221	ENST00000589867	IGKV1D-33	P01593	117 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	IGKV1-33	P01594	117 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	SCT	P09683	121 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	VSIG10L2	P0DP72	767 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	TGFBR1	P36897	503 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	ARHGDIB	P52566	201 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	HERPUD1	Q15011	391 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	ABCA11P	Q4W5N1	156 aa		13.76	□□□□□ -0.21
MBD1-221	ENST00000589867	C11orf88	Q6PI97	169 aa		13.76	□□□□□ -0.21

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